Strain identifier

BacDive ID: 139099

Type strain: No

Species: Exiguobacterium aurantiacum

Strain Designation: LRA 143 06 89

Strain history: CIP <- 1993, R. Mercier, bioMérieux, La Balme-les-Grottes, France: strain LRA 143 06 89 <- Y. Peloux, Marseille Hosp., France

NCBI tax ID(s): 33987 (species)

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General

@ref: 41144

BacDive-ID: 139099

keywords: Bacteria, facultative anaerobe, mesophilic, Gram-positive, motile, rod-shaped

description: Exiguobacterium aurantiacum LRA 143 06 89 is a facultative anaerobe, mesophilic, Gram-positive bacterium of the family Bacillaceae.

NCBI tax id

  • NCBI tax id: 33987
  • Matching level: species

strain history

  • @ref: 41144
  • history: CIP <- 1993, R. Mercier, bioMérieux, La Balme-les-Grottes, France: strain LRA 143 06 89 <- Y. Peloux, Marseille Hosp., France

doi: 10.13145/bacdive139099.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Exiguobacterium
  • species: Exiguobacterium aurantiacum
  • full scientific name: Exiguobacterium aurantiacum Collins et al. 1984

@ref: 41144

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Caryophanales, not assigned to family

genus: Exiguobacterium

species: Exiguobacterium aurantiacum

strain designation: LRA 143 06 89

type strain: no

Morphology

cell morphology

  • @ref: 41144
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: yes

colony morphology

  • @ref: 41144

pigmentation

  • @ref: 41144
  • production: no
  • name: Flexirubin

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
41144MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
41144CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
41144positivegrowth37mesophilic
41144positivegrowth10-41
41144nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 41144
  • oxygen tolerance: facultative anaerobe

halophily

@refsaltgrowthtested relationconcentration
41144NaClpositivegrowth0-6 %
41144NaClnogrowth8 %
41144NaClnogrowth10 %

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371gluconate-builds acid from24265
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose-builds acid from32528
68371xylitol-builds acid from17151
68371raffinose-builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371trehalose-builds acid from27082
68371sucrose-builds acid from17992
68371melibiose-builds acid from28053
68371lactose-builds acid from17716
68371maltose-builds acid from17306
68371cellobiose-builds acid from17057
68371salicin-builds acid from17814
68371esculin+builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine-builds acid from59640
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose-builds acid from16024
68371D-galactose-builds acid from12936
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371L-arabinose-builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
41144citrate-carbon source16947
41144esculin+hydrolysis4853
41144hippurate-hydrolysis606565
41144nitrate-reduction17632
41144nitrite-reduction16301
41144nitrate+respiration17632
68379nitrate-reduction17632
68379esculin+hydrolysis4853
68379urea+hydrolysis16199
68379gelatin+hydrolysis5291
68379D-glucose+fermentation17634
68379D-ribose+fermentation16988
68379D-xylose+fermentation65327
68379D-mannitol+fermentation16899
68379maltose+fermentation17306
68379lactose+fermentation17716
68379sucrose+fermentation17992
68379glycogen+fermentation28087

antibiotic resistance

  • @ref: 41144
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

  • @ref: 41144
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
4114415688acetoin-
4114417234glucose-

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase+
68379urease+3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase+3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase+3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15
41144oxidase-
41144beta-galactosidase-3.2.1.23
41144alcohol dehydrogenase-1.1.1.1
41144gelatinase+
41144amylase+
41144DNase-
41144caseinase+3.4.21.50
41144catalase+1.11.1.6
41144tween esterase-
41144gamma-glutamyltransferase+2.3.2.2
41144lecithinase-
41144lipase-
41144lysine decarboxylase-4.1.1.18
41144ornithine decarboxylase-4.1.1.17
41144protease-
41144urease-3.5.1.5
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase-3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    52712C12:0312
    52712C14:04.314
    52712C16:022.816
    52712C18:04.118
    52712C11:0 iso0.910.605
    52712C12:0 ISO6.111.608
    52712C13:0 ANTEISO13.712.701
    52712C13:0 iso16.212.612
    52712C15:0 ANTEISO0.714.711
    52712C15:0 ISO5.614.621
    52712C16:0 iso1.215.626
    52712C16:0 N alcohol1.215.549
    52712C16:1 ω7c3.215.819
    52712C17:0 anteiso0.716.722
    52712C17:0 iso4.116.629
    52712C18:1 ω9c317.769
    52712C18:2 ω6,9c/C18:0 ANTE8.517.724
    52712Unidentified0.713.245
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
52712-+-+-++++++-+++++++++

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
52712--++-------+-+-++---
41144-+++-+-----+-+-++---

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
41144+/----+/-+/---+/--+/-+/------+/-+/------+----------+/-+/--+/-----------

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
41144++-+-+-+-++-------+---+--------+-+------+---++--+-+++------+---------------+-----------------------

Isolation, sampling and environmental information

isolation

@refsampling dategeographic locationcountryorigin.countrycontinentisolation date
527121989Marseille ?FranceFRAEurope
411441989

Safety information

risk assessment

  • @ref: 41144
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 41144

culture collection no.: CIP 103729, ATCC 49676, CCUG 35409

straininfo link

  • @ref: 95677
  • straininfo: 42614

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
41144Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20103729Collection of Institut Pasteur (CIP 103729)
52712Curators of the CCUGhttps://www.ccug.se/strain?id=35409Culture Collection University of Gothenburg (CCUG) (CCUG 35409)
68371Automatically annotated from API 50CH acid
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
95677Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID42614.1