Strain identifier

BacDive ID: 13880

Type strain: Yes

Species: Aromatoleum evansii

Strain Designation: KB 740

Strain history: 2007, R. Rabus, Oldenburg Univ., Oldenburg, Germany: strain KB740

NCBI tax ID(s): 59406 (species)

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General

@ref: 2880

BacDive-ID: 13880

DSM-Number: 6898

keywords: 16S sequence, Bacteria, aerobe, mesophilic

description: Aromatoleum evansii KB 740 is an aerobe, mesophilic bacterium that was isolated from creek sediment.

NCBI tax id

  • NCBI tax id: 59406
  • Matching level: species

strain history

@refhistory
2880<- G. Fuchs (Pseudomonas sp. KB 740)
366582007, R. Rabus, Oldenburg Univ., Oldenburg, Germany: strain KB740

doi: 10.13145/bacdive13880.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Rhodocyclales
  • family: Zoogloeaceae
  • genus: Aromatoleum
  • species: Aromatoleum evansii
  • full scientific name: Aromatoleum evansii (Anders et al. 1995) Rabus et al. 2019

  • synonyms

    • @ref: 20215
    • synonym: Azoarcus evansii

@ref: 2880

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Rhizobiales

family: Zoogloeaceae

genus: Aromatoleum

species: Aromatoleum evansii

full scientific name: Aromatoleum evansii (Anders et al. 1995) Rabus et al. 2019

strain designation: KB 740

type strain: yes

Morphology

colony morphology

  • @ref: 2880
  • incubation period: 3-7 days

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
2880THAUERA AROMATICA MEDIUM (DSMZ Medium 586)yeshttps://mediadive.dsmz.de/medium/586Name: THAUERA AROMATICA MEDIUM (DSMZ Medium 586) Composition: K2HPO4 5.83251 g/l KNO3 1.97044 g/l KH2PO4 0.803941 g/l Na-benzoate 0.70936 g/l NH4Cl 0.522168 g/l MgSO4 x 7 H2O 0.197044 g/l CaCl2 x 2 H2O 0.0246305 g/l HCl 0.0246305 g/l FeCl2 x 4 H2O 0.0147783 g/l CoCl2 x 6 H2O 0.00187192 g/l MnCl2 x 4 H2O 0.000985222 g/l ZnCl2 0.000689655 g/l Na2MoO4 x 2 H2O 0.00035468 g/l p-Aminobenzoic acid 0.000246305 g/l alpha-lipoic acid 0.000246305 g/l Riboflavin 0.000246305 g/l Pantothenic acid 0.000246305 g/l Vitamin B12 0.000246305 g/l Thiamine-HCl x 2 H2O 0.000246305 g/l NiCl2 x 6 H2O 0.000236453 g/l Nicotine amide 0.000123153 g/l Nicotinic acid 0.000123153 g/l Folic acid 9.85222e-05 g/l Biotin 9.85222e-05 g/l H3BO3 5.91133e-05 g/l Pyridoxamine hydrochloride 4.92611e-05 g/l CuCl2 x 2 H2O 1.97044e-05 g/l Distilled water
2880REACTIVATION WITH LIQUID MEDIUM 830 (DSMZ Medium 830c)yeshttps://mediadive.dsmz.de/medium/830cName: REACTIVATION WITH LIQUID MEDIUM 830 (DSMZ Medium 830c) Composition: Agar 15.0 g/l Yeast extract 0.5 g/l Proteose peptone 0.5 g/l Casamino acids 0.5 g/l Glucose 0.5 g/l Starch 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
36658MEDIUM 6 - Columbia agar with 10 % horse bloodyesDistilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)

culture temp

@refgrowthtypetemperaturerange
2880positivegrowth30mesophilic
36658positivegrowth30mesophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
2880aerobe
2880anaerobe

compound production

@refcompound
28802 aminobenzoate-CoA ligase
28802 aminobenzoyl-CoA monooxygenase

Isolation, sampling and environmental information

isolation

  • @ref: 2880
  • sample type: creek sediment
  • country: USA
  • origin.country: USA
  • continent: North America

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#River (Creek)
#Environmental#Aquatic#Sediment

taxonmaps

  • @ref: 69479
  • File name: preview.99_3393.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_129;96_1730;97_2071;98_2546;99_3393&stattab=map
  • Last taxonomy: Aromatoleum
  • 16S sequence: X77679
  • Sequence Identity:
  • Total samples: 645
  • soil counts: 391
  • aquatic counts: 174
  • animal counts: 53
  • plant counts: 27

Safety information

risk assessment

  • @ref: 2880
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 20218
  • description: A.evansii 16S rRNA gene
  • accession: X77679
  • length: 1526
  • database: ena
  • NCBI tax ID: 59406

External links

@ref: 2880

culture collection no.: DSM 6898, NBRC 107771

straininfo link

  • @ref: 83055
  • straininfo: 48321

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny7537067Taxonomic position of aromatic-degrading denitrifying pseudomonad strains K 172 and KB 740 and their description as new members of the genera Thauera, as Thauera aromatica sp. nov., and Azoarcus, as Azoarcus evansii sp. nov., respectively, members of the beta subclass of the Proteobacteria.Anders HJ, Kaetzke A, Kampfer P, Ludwig W, Fuchs GInt J Syst Bacteriol10.1099/00207713-45-2-3271995Base Sequence, Biodegradation, Environmental, DNA, Bacterial/genetics, Fatty Acids/metabolism, Gram-Negative Facultatively Anaerobic Rods/*classification/metabolism, Molecular Sequence Data, Nitrogen/metabolism, Phylogeny, Pseudomonas/classification, Quinones/metabolism, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/geneticsMetabolism
Phylogeny30762514Aromatoleum gen. nov., a novel genus accommodating the phylogenetic lineage including Azoarcus evansii and related species, and proposal of Aromatoleum aromaticum sp. nov., Aromatoleum petrolei sp. nov., Aromatoleum bremense sp. nov., Aromatoleum toluolicum sp. nov. and Aromatoleum diolicum sp. nov.Rabus R, Wohlbrand L, Thies D, Meyer M, Reinhold-Hurek B, Kampfer PInt J Syst Evol Microbiol10.1099/ijsem.0.0032442019Azoarcus, Bacterial Typing Techniques, DNA, Bacterial/genetics, Nucleic Acid Hybridization, *Phylogeny, Proteomics, RNA, Ribosomal, 16S/genetics, Rhodocyclaceae/*classification, Sequence Analysis, DNATranscriptome

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
2880Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 6898)https://www.dsmz.de/collection/catalogue/details/culture/DSM-6898
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
36658Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/7220
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
83055Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID48321.1StrainInfo: A central database for resolving microbial strain identifiers