Strain identifier

BacDive ID: 138517

Type strain: Yes

Species: Aequorivita crocea

Strain history: 2002, J. Bowman, Tasmania Univ., Tasmania, Australia: strain ACAM 642

NCBI tax ID(s): 153268 (species)

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General

@ref: 39894

BacDive-ID: 138517

DSM-Number: 14293

keywords: 16S sequence, Bacteria, psychrophilic

description: Aequorivita crocea CIP 107456 is a psychrophilic bacterium of the family Flavobacteriaceae.

NCBI tax id

  • NCBI tax id: 153268
  • Matching level: species

strain history

  • @ref: 39894
  • history: 2002, J. Bowman, Tasmania Univ., Tasmania, Australia: strain ACAM 642

doi: 10.13145/bacdive138517.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Flavobacteriaceae
  • genus: Aequorivita
  • species: Aequorivita crocea
  • full scientific name: Aequorivita crocea Bowman and Nichols 2002

@ref: 39894

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Aequorivita

species: Aequorivita crocea

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 39894
  • name: Marine agar (MA)
  • growth: yes
  • composition: Distilled water make up to (1000.000 ml);Marine agar (55.100 g)

culture temp

  • @ref: 39894
  • growth: positive
  • type: growth
  • temperature: 20
  • range: psychrophilic

Isolation, sampling and environmental information

isolation

  • @ref: 39894
  • geographic location: Antarctic coast
  • country: Antarctica
  • origin.country: ATA
  • continent: Antarctica

taxonmaps

  • @ref: 69479
  • File name: preview.99_65741.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_74;96_182;97_13478;98_16601;99_65741&stattab=map
  • Last taxonomy: Aequorivita crocea
  • 16S sequence: AY027806
  • Sequence Identity:
  • Total samples: 12
  • soil counts: 6
  • aquatic counts: 3
  • animal counts: 3

Sequence information

16S sequences

  • @ref: 39894
  • description: Aequorivita crocea Y12-2T 16S ribosomal RNA gene, partial sequence
  • accession: AY027806
  • length: 1422
  • database: ena
  • NCBI tax ID: 153268

External links

@ref: 39894

culture collection no.: CIP 107456, LMG 21433, DSM 14293

straininfo link

  • @ref: 95225
  • straininfo: 86447

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
39894Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20107456Collection of Institut Pasteur (CIP 107456)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
95225Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID86447.1