Strain identifier
BacDive ID: 138485
Type strain: 
Species: Acinetobacter sp.
Strain Designation: Gerner-Smidt 10095
Strain history: 2012, A. Nemec, Inst. Pasteur, Paris, France: strain NIPH 817
NCBI tax ID(s): 520708 (species)
version 8.1 (current version)
General
@ref: 39846
BacDive-ID: 138485
keywords: genome sequence, Bacteria, mesophilic, Gram-negative
description: Acinetobacter sp. Gerner-Smidt 10095 is a mesophilic, Gram-negative bacterium of the family Moraxellaceae.
NCBI tax id
- NCBI tax id: 520708
- Matching level: species
strain history
- @ref: 39846
- history: 2012, A. Nemec, Inst. Pasteur, Paris, France: strain NIPH 817
doi: 10.13145/bacdive138485.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Moraxellaceae
- genus: Acinetobacter
- species: Acinetobacter sp.
- full scientific name: Acinetobacter Brisou and Prévot 1954 (Approved Lists 1980)
@ref: 39846
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Moraxellaceae
genus: Acinetobacter
species: Acinetobacter sp.
strain designation: Gerner-Smidt 10095
type strain: no
Morphology
cell morphology
- @ref: 69480
- gram stain: negative
- confidence: 99.994
Culture and growth conditions
culture medium
- @ref: 39846
- name: MEDIUM 72- for trypto casein soja agar
- growth: yes
- composition: Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 39846 | positive | growth | 30 | mesophilic |
| 52319 | no | growth | 44 | thermophilic |
Physiology and metabolism
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69481 | no | 100 |
| 69480 | no | 99.994 |
Isolation, sampling and environmental information
isolation
| @ref | country | origin.country | continent | sample type |
|---|---|---|---|---|
| 39846 | Denmark | DNK | Europe | |
| 52319 | Denmark | DNK | Europe | Human abscess |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | |
| #Host Body-Site | #Other | #Abscess |
| #Infection | #Patient |
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Acinetobacter sp. NIPH 817 | GCA_000368405 | scaffold | ncbi | 520708 |
| 66792 | Acinetobacter sp. NIPH 817 | 520708.3 | wgs | patric | 520708 |
| 66792 | Acinetobacter sp. NIPH 817 | 2565956670 | draft | img | 520708 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 100 | no |
| motile | no | 89.878 | no |
| flagellated | no | 93.143 | no |
| gram-positive | no | 96.842 | no |
| anaerobic | no | 98.481 | no |
| aerobic | yes | 94.132 | no |
| halophile | no | 86.374 | no |
| spore-forming | no | 96.576 | no |
| thermophile | no | 99.934 | no |
| glucose-util | no | 65.624 | no |
| glucose-ferment | no | 81.39 | no |
External links
@ref: 39846
culture collection no.: CIP 110472, NIPH 817, CCUG 34786
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 39846 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20110472 | Collection of Institut Pasteur (CIP 110472) | |
| 52319 | Curators of the CCUG | https://www.ccug.se/strain?id=34786 | Culture Collection University of Gothenburg (CCUG) (CCUG 34786) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 |