Strain identifier

BacDive ID: 138335

Type strain: No

Species: Fannyhessea vaginae

Strain Designation: NN037.01

Strain history: CIP <- 1999, CCUG, Atopobium vaginae <- N. Nilolaitchouk/B. Andersch, GU, Göteborg, Sweden: strain NN037.01

NCBI tax ID(s): 82135 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 8.1 (current version)

General

@ref: 39482

BacDive-ID: 138335

keywords: Bacteria, anaerobe, mesophilic, Gram-positive, rod-shaped

description: Fannyhessea vaginae NN037.01 is an anaerobe, mesophilic, Gram-positive bacterium of the family Atopobiaceae.

NCBI tax id

  • NCBI tax id: 82135
  • Matching level: species

strain history

  • @ref: 39482
  • history: CIP <- 1999, CCUG, Atopobium vaginae <- N. Nilolaitchouk/B. Andersch, GU, Göteborg, Sweden: strain NN037.01

doi: 10.13145/bacdive138335.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Coriobacteriia
  • order: Coriobacteriales
  • family: Atopobiaceae
  • genus: Fannyhessea
  • species: Fannyhessea vaginae
  • full scientific name: Fannyhessea vaginae (Rodriguez Jovita et al. 1999) Nouioui et al. 2018

  • synonyms

    • @ref: 20215
    • synonym: Atopobium vaginae

@ref: 39482

domain: Bacteria

phylum: Actinobacteria

class: Coriobacteriia

order: Coriobacteriales

family: Atopobiaceae

genus: Fannyhessea

species: Fannyhessea vaginae

strain designation: NN037.01

type strain: no

Morphology

cell morphology

  • @ref: 39482
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: no

colony morphology

  • @ref: 39482

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
39482MEDIUM 6 - Columbia agar with 10 % horse bloodyesDistilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
39482CIP Medium 85yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=85
39482CIP Medium 10yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=10
39482CIP Medium 6yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=6

culture temp

@refgrowthtypetemperaturerange
39482positivegrowth37mesophilic
56202positivegrowth37mesophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
56202anaerobe
39482anaerobe

halophily

  • @ref: 39482
  • salt: NaCl
  • growth: no
  • tested relation: growth
  • concentration: 6.5 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
394824853esculin-hydrolysis
39482606565hippurate-hydrolysis
3948217632nitrate-reduction
3948216301nitrite-reduction
6838016199urea-hydrolysis
6838029016arginine+hydrolysis
6838016024D-mannose+fermentation
6838016634raffinose-fermentation
6838029985L-glutamate-degradation
6838017632nitrate-reduction
6838027897tryptophan-energy source

metabolite production

  • @ref: 68380
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetaboliteindole testvoges-proskauer-test
6838035581indole-
3948215688acetoin-

enzymes

@refvalueactivityec
68380serine arylamidase+
68380glutamyl-glutamate arylamidase-
68380histidine arylamidase+
68380glycin arylamidase+
68380alanine arylamidase+3.4.11.2
68380tyrosine arylamidase+
68380pyrrolidonyl arylamidase-3.4.19.3
68380leucine arylamidase+3.4.11.1
68380phenylalanine arylamidase+
68380leucyl glycin arylamidase+3.4.11.1
68380proline-arylamidase+3.4.11.5
68380L-arginine arylamidase+
68380alkaline phosphatase+3.1.3.1
68380tryptophan deaminase-4.1.99.1
68380alpha-fucosidase-3.2.1.51
68380glutamate decarboxylase-4.1.1.15
68380N-acetyl-beta-glucosaminidase-3.2.1.52
68380beta-glucuronidase-3.2.1.31
68380alpha-arabinosidase-3.2.1.55
68380beta-glucosidase-3.2.1.21
68380alpha-glucosidase-3.2.1.20
68380beta-Galactosidase 6-phosphate-
68380beta-galactosidase-3.2.1.23
68380alpha-galactosidase-3.2.1.22
68380arginine dihydrolase+3.5.3.6
68380urease-3.5.1.5
39482oxidase-
39482beta-galactosidase-3.2.1.23
39482alcohol dehydrogenase-1.1.1.1
39482catalase-1.11.1.6
39482gamma-glutamyltransferase-2.3.2.2
39482lysine decarboxylase-4.1.1.18
39482ornithine decarboxylase-4.1.1.17
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
39482--++-+----+---------

API rID32A

@refUREADH Argalpha GALbeta GALbeta GPalpha GLUbeta GLUalpha ARAbeta GURbeta NAGMNERAFGDCalpha FUCNITINDPALArgAProALGAPheALeuAPyrATyrAAlaAGlyAHisAGGASerA
56202-+--------+-----++++++-++++-+

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typesampling dateisolation date
39482GöteborgSwedenSWEEurope
56202GöteborgSwedenSWEEuropeHuman vagina,fornix,vaginosis1999-09-02
39482GöteborgSwedenSWEEuropeHuman, Vagina1999

isolation source categories

Cat1Cat2Cat3
#Host Body-Site#Urogenital tract#Vagina
#Infection#Disease
#Infection#Patient
#Host#Human#Female

Safety information

risk assessment

  • @ref: 39482
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 39482

culture collection no.: CIP 106319, CCUG 44156

straininfo link

  • @ref: 95090
  • straininfo: 67294

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
39482Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20106319Collection of Institut Pasteur (CIP 106319)
56202Curators of the CCUGhttps://www.ccug.se/strain?id=44156Culture Collection University of Gothenburg (CCUG) (CCUG 44156)
68380Automatically annotated from API rID32A
68382Automatically annotated from API zym
95090Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID67294.1