Strain identifier

BacDive ID: 138275

Type strain: No

Species: Cupriavidus pauculus

Strain history: CIP <- 1999, CCUG <- Gen. Diag. Dept., PHLS, Göteborg, Sweden

NCBI tax ID(s): 82633 (species)

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General

@ref: 39400

BacDive-ID: 138275

keywords: Bacteria, obligate aerobe, Gram-negative, motile, rod-shaped

description: Cupriavidus pauculus CIP 105945 is an obligate aerobe, Gram-negative, motile bacterium of the family Burkholderiaceae.

NCBI tax id

  • NCBI tax id: 82633
  • Matching level: species

strain history

  • @ref: 39400
  • history: CIP <- 1999, CCUG <- Gen. Diag. Dept., PHLS, Göteborg, Sweden

doi: 10.13145/bacdive138275.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Burkholderiaceae
  • genus: Cupriavidus
  • species: Cupriavidus pauculus
  • full scientific name: Cupriavidus pauculus (Vandamme et al. 1999) Vandamme and Coenye 2004

  • synonyms

    @refsynonym
    20215Ralstonia paucula
    20215Wautersia paucula

@ref: 39400

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Burkholderiaceae

genus: Cupriavidus

species: Cupriavidus pauculus

type strain: no

Morphology

cell morphology

  • @ref: 39400
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

pigmentation

  • @ref: 39400
  • production: no
  • name: Pyocyanin

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
39400MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
39400CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperature
39400positivegrowth30
39400positivegrowth10-41
39400nogrowth5

Physiology and metabolism

oxygen tolerance

  • @ref: 39400
  • oxygen tolerance: obligate aerobe

halophily

@refsaltgrowthtested relationconcentration
39400NaClpositivegrowth0-2 %
39400NaClnogrowth4 %
39400NaClnogrowth6 %
39400NaClnogrowth8 %
39400NaClnogrowth10 %

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371gluconate-builds acid from24265
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose-builds acid from32528
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen-builds acid from28087
68371starch-builds acid from28017
68371raffinose-builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371trehalose-builds acid from27082
68371sucrose-builds acid from17992
68371melibiose-builds acid from28053
68371lactose-builds acid from17716
68371maltose-builds acid from17306
68371cellobiose-builds acid from17057
68371salicin-builds acid from17814
68371esculin-builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine-builds acid from59640
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371D-mannitol-builds acid from16899
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose-builds acid from16024
68371D-fructose-builds acid from15824
68371D-glucose-builds acid from17634
68371D-galactose-builds acid from12936
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose-builds acid from65327
68371D-ribose-builds acid from16988
68371L-arabinose-builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
68371glycerol-builds acid from17754
39400citrate+carbon source16947
39400esculin-hydrolysis4853
39400nitrate-reduction17632
39400nitrite-reduction16301
39400nitrate-respiration17632

antibiotic resistance

  • @ref: 39400
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

  • @ref: 39400
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
39400oxidase+
39400beta-galactosidase-3.2.1.23
39400alcohol dehydrogenase-1.1.1.1
39400gelatinase-
39400amylase-
39400DNase-
39400caseinase-3.4.21.50
39400catalase+1.11.1.6
39400tween esterase+
39400lecithinase-
39400lipase-
39400lysine decarboxylase-4.1.1.18
39400ornithine decarboxylase-4.1.1.17
39400protease-
39400tryptophan deaminase-
39400urease+3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
39400-+++-+----++--------

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
39400-------------------------------------------------

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
39400-------------------------------+-----------+++-+-+++++---++-++++---+-----+-++++++++----++++++++++++

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typesampling dateisolation date
39400GöteborgSwedenSWEEurope
45409GöteborgSwedenSWEEuropeHuman wound,male newborn1981-08-07
39400GöteborgSwedenSWEEuropeHuman, Wound1981

isolation source categories

Cat1Cat2Cat3
#Host#Human#Child
#Host#Human#Male
#Host Body-Site#Other#Wound
#Host#Juvenile

Safety information

risk assessment

  • @ref: 39400
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 39400

culture collection no.: CIP 105945, CCUG 11264, LMG 3319

straininfo link

  • @ref: 95032
  • straininfo: 1698

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
39400Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20105945Collection of Institut Pasteur (CIP 105945)
45409Curators of the CCUGhttps://www.ccug.se/strain?id=11264Culture Collection University of Gothenburg (CCUG) (CCUG 11264)
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
95032Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID1698.1