Strain identifier

BacDive ID: 138143

Type strain: No

Species: Cedecea lapagei

Strain Designation: 817-78, 007

Strain history: CIP <- 1996, P.A.D. Grimont, Inst. Pasteur, Paris, France: strain 007 <- CDC: strain 817-78

NCBI tax ID(s): 158823 (species)

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General

@ref: 39163

BacDive-ID: 138143

keywords: Bacteria, facultative anaerobe, mesophilic, Gram-negative, rod-shaped

description: Cedecea lapagei 817-78 is a facultative anaerobe, mesophilic, Gram-negative bacterium of the family Enterobacteriaceae.

NCBI tax id

  • NCBI tax id: 158823
  • Matching level: species

strain history

  • @ref: 39163
  • history: CIP <- 1996, P.A.D. Grimont, Inst. Pasteur, Paris, France: strain 007 <- CDC: strain 817-78

doi: 10.13145/bacdive138143.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Enterobacteriaceae
  • genus: Cedecea
  • species: Cedecea lapagei
  • full scientific name: Cedecea lapagei Grimont et al. 1981

@ref: 39163

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacterales

family: Enterobacteriaceae

genus: Cedecea

species: Cedecea lapagei

strain designation: 817-78, 007

type strain: no

Morphology

cell morphology

  • @ref: 39163
  • gram stain: negative
  • cell shape: rod-shaped

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
39163MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
39163CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperature
39163positivegrowth30
39163positivegrowth5-41

Physiology and metabolism

oxygen tolerance

  • @ref: 39163
  • oxygen tolerance: facultative anaerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3916329864mannitol+fermentation
3916316947citrate+carbon source
3916317234glucose+fermentation
3916317716lactose-fermentation
3916317632nitrate+reduction
3916316301nitrite-reduction
3916315792malonate+assimilation
39163132112sodium thiosulfate-builds gas from
3916317234glucose+degradation
68371320061methyl alpha-D-glucopyranoside-builds acid from
6837112936D-galactose+builds acid from
68371Potassium 2-ketogluconate+builds acid from
6837124265gluconate+builds acid from
6837118403L-arabitol-builds acid from
6837118333D-arabitol+builds acid from
6837118287L-fucose-builds acid from
6837128847D-fucose-builds acid from
6837116443D-tagatose-builds acid from
6837162318D-lyxose-builds acid from
6837132528turanose-builds acid from
6837128066gentiobiose+builds acid from
6837117151xylitol-builds acid from
6837128087glycogen-builds acid from
6837128017starch-builds acid from
6837116634raffinose-builds acid from
683716731melezitose-builds acid from
6837115443inulin-builds acid from
6837127082trehalose+builds acid from
6837128053melibiose-builds acid from
6837117057cellobiose+builds acid from
6837117814salicin+builds acid from
683714853esculin+builds acid from
6837118305arbutin+builds acid from
6837127613amygdalin-builds acid from
6837159640N-acetylglucosamine+builds acid from
6837143943methyl alpha-D-mannoside-builds acid from
6837117924D-sorbitol-builds acid from
6837116899D-mannitol+builds acid from
6837116813galactitol-builds acid from
6837162345L-rhamnose-builds acid from
6837117266L-sorbose-builds acid from
6837116024D-mannose+builds acid from
6837115824D-fructose+builds acid from
6837117634D-glucose+builds acid from
6837174863methyl beta-D-xylopyranoside-builds acid from
6837115963ribitol-builds acid from
6837165328L-xylose-builds acid from
6837165327D-xylose-builds acid from
6837116988D-ribose+builds acid from
6837130849L-arabinose-builds acid from
6837117108D-arabinose-builds acid from
6837117113erythritol-builds acid from
6837117754glycerol+builds acid from

antibiotic resistance

  • @ref: 39163
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: yes
  • is resistant: no

metabolite production

  • @ref: 39163
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
3916315688acetoin+
3916317234glucose+

enzymes

@refvalueactivityec
68382alpha-mannosidase-3.2.1.24
68382beta-glucosidase+3.2.1.21
68382alpha-glucosidase+3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382acid phosphatase+3.1.3.2
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382cystine arylamidase-3.4.11.3
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382lipase (C 14)-
68382esterase (C 4)-
68382esterase lipase (C 8)+
68382alkaline phosphatase+3.1.3.1
39163oxidase-
39163beta-galactosidase+3.2.1.23
39163alcohol dehydrogenase+1.1.1.1
39163gelatinase-
39163catalase+1.11.1.6
39163lysine decarboxylase-4.1.1.18
39163ornithine decarboxylase-4.1.1.17
39163phenylalanine ammonia-lyase-4.3.1.24
39163tryptophan deaminase-
39163urease-3.5.1.5
68382alpha-fucosidase-3.2.1.51
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382naphthol-AS-BI-phosphohydrolase+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
39163-+-+-+----++-+-+++--

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
39163+---+----++++---+/-+---+-+++++/-+/--+/-+------+-----+-+++/-

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
39163+++++----+-+---+++++------+----+++---------+---++++--++++--++--------------+---++-+---+--++++++---+

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample type
39163New-YorkUSAUSANorth America
39163New YorkUnited States of AmericaUSANorth AmericaHuman, Sputum

Safety information

risk assessment

  • @ref: 39163
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 39163

culture collection no.: CIP 105018

straininfo link

  • @ref: 94932
  • straininfo: 67777

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
39163Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20105018Collection of Institut Pasteur (CIP 105018)
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
94932Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID67777.1