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Strain identifier

BacDive ID: 13812

Type strain: Yes

Species: Cereibacter sphaeroides

Strain history: IFO 12203 <-- NCIB 8253 <-- S. R. Elsden <-- C. B. van Niel ATH 2.4.1.

NCBI tax ID(s): 1063 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 2125

BacDive-ID: 13812

DSM-Number: 158

keywords: genome sequence, 16S sequence, Bacteria, anaerobe, mesophilic

description: Cereibacter sphaeroides DSM 158 is an anaerobe, mesophilic bacterium of the family Rhodobacteraceae.

NCBI tax id

  • NCBI tax id: 1063
  • Matching level: species

strain history

doi: 10.13145/bacdive13812.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Rhodobacterales
  • family: Rhodobacteraceae
  • genus: Cereibacter
  • species: Cereibacter sphaeroides
  • full scientific name: Cereibacter sphaeroides (van Niel 1944) Hördt et al. 2020
  • synonyms

    @refsynonym
    20215Luteovulum sphaeroides
    20215Rhodopseudomonas sphaeroides
    20215Rhodobacter sphaeroides

@ref: 2125

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhodobacterales

family: Rhodobacteraceae

genus: Cereibacter

species: Cereibacter sphaeroides

full scientific name: Cereibacter sphaeroides (van Niel 1944) Hördt et al. 2020

type strain: yes

Morphology

cell morphology

  • @ref: 69480
  • gram stain: negative
  • confidence: 99.408

colony morphology

  • @ref: 50618
  • incubation period: 3 days

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
2125RHODOSPIRILLACEAE MEDIUM (modified) (DSMZ Medium 27)yeshttps://mediadive.dsmz.de/medium/27Name: RHODOSPIRILLACEAE MEDIUM (modified) (DSMZ Medium 27) Composition: Disodium succinate 1.0 g/l KH2PO4 0.5 g/l Ammonium acetate 0.5 g/l NaCl 0.4 g/l NH4Cl 0.4 g/l MgSO4 x 7 H2O 0.4 g/l Yeast extract 0.3 g/l L-Cysteine HCl 0.3 g/l CaCl2 x 2 H2O 0.05 g/l Fe(III) citrate 0.005 g/l Resazurin 0.005 g/l H3BO3 0.0003 g/l CoCl2 x 6 H2O 0.0002 g/l ZnSO4 x 7 H2O 0.0001 g/l MnCl2 x 4 H2O 3e-05 g/l Na2MoO4 x 2 H2O 3e-05 g/l NiCl2 x 6 H2O 2e-05 g/l CuCl2 x 2 H2O 1e-05 g/l Vitamin B12 Distilled water
36213MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)

culture temp

@refgrowthtypetemperaturerange
2125positivegrowth25mesophilic
36213positivegrowth30mesophilic
50618positivegrowth25mesophilic
67770positivegrowth30mesophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
2125anaerobe
50618anaerobe

spore formation

  • @ref: 69480
  • spore formation: no
  • confidence: 97.987

compound production

@refcompound
2125carotenoids
2125ubiquinone-10
2125hydrogen

halophily

  • @ref: 69480
  • halophily level: non-halophilic
  • confidence: 98.598

observation

  • @ref: 67770
  • observation: quinones: Q-10

Isolation, sampling and environmental information

taxonmaps

  • @ref: 69479
  • File name: preview.99_1809.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_19;96_1024;97_1194;98_1430;99_1809&stattab=map
  • Last taxonomy: Luteovulum
  • 16S sequence: X53855
  • Sequence Identity:
  • Total samples: 17229
  • soil counts: 1540
  • aquatic counts: 10335
  • animal counts: 4862
  • plant counts: 492

Safety information

risk assessment

  • @ref: 2125
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Rhodobacter sphaeroides 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequenceAF3381821151ena1063
20218Rhodobacter sphaeroides strain ATCC 17023 16S ribosomal RNA gene, partial sequenceDQ3423211389ena1063
20218Rhodobacter sphaeroides (ATCC 17023) 16S ribosomal RNA (partial)M55498262ena272943
20218R. sphaeroides ribosomal RNA operon rrnA(16S rRNA,Ile tRNA, Ala tRNA, 23S rRNA, 5S rRNA, f-Met tRNA)X538536442ena1063
20218R. sphaeroides ribosomal RNA operon rrnB (16S rRNA,Ile tRNA, Ala tRNA, 23S rRNA, 5S rRNA, f-Met tRNA)X538546565ena1063
20218R. sphaeroides ribosomal RNA operon rrnC (16S rRNA,Ile tRNA, Ala tRNA, 23S rRNA, 5S rRNA, f-Met tRNA)X538556163ena1063
20218Rhodobacter sphaeroides gene for 16S rRNA, strain: IFO 12203D164251389ena1063

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Cereibacter sphaeroides NBRC 12203GCA_007991035contigncbi1063
66792Cereibacter sphaeroides DSM 158GCA_009797605completencbi1063
66792Rhodobacter sphaeroides strain DSM 1581063.96completepatric1063
66792Rhodobacter sphaeroides strain NBRC 122031063.83wgspatric1063
66792Luteovulum sphaeroides NCIB 8253651717148draftimg1063
66792Salmonella enterica subsp. enterica serovar Muenchen CVM N43482GCA_001240705contigpatric596
66792Salmonella enterica subsp. enterica serovar Saintpaul BCW_2166GCA_002032725contigpatric90105

GC content

  • @ref: 67770
  • GC-content: 68.4-69.9
  • method: Buoyant density centrifugation (BD)

External links

@ref: 2125

culture collection no.: DSM 158, ATCC 17023, IAM 14237, NCIB 8253, CCUG 31486, ATCC 11167, LMG 2827, ATCC 14690, CIP 60.6, ATH 2.4.1, JCM 6121, BCRC 16407, CECT 300, CGMCC 1.1737, CGMCC 1.3368, IFO 12203, KCTC 1434, NBRC 12203, NCIMB 8253, NCIMB 8287

straininfo link

@refpassport
20218http://www.straininfo.net/strains/21010
20218http://www.straininfo.net/strains/21007
20218http://www.straininfo.net/strains/156432
20218http://www.straininfo.net/strains/21012

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Metabolism12621[Fermentation of pyruvate by 7 species of phototrophic purple bacteria].Gurgun V, Kirchner G, Pfennig NZ Allg Mikrobiol10.1002/jobm.36301608021976Acetates/metabolism, Acetoin/biosynthesis, Anaerobiosis, Bacterial Proteins/biosynthesis, Butylene Glycols/metabolism, Carbon Dioxide/biosynthesis, Chromatium/*metabolism, Darkness, Fermentation, Formates/metabolism, Hydrogen-Ion Concentration, Lactates/biosynthesis, Propionates/metabolism, Pyruvates/*metabolism, Rhodobacter sphaeroides/metabolism, Rhodopseudomonas/*metabolism, Rhodospirillum rubrum/*metabolism, Species SpecificityPhylogeny
Enzymology1499989Cloning of poly(3-hydroxybutyric acid) synthase genes of Rhodobacter sphaeroides and Rhodospirillum rubrum and heterologous expression in Alcaligenes eutrophus.Hustede E, Steinbuchel A, Schlegel HGFEMS Microbiol Lett10.1016/0378-1097(92)90476-51992Acyltransferases/biosynthesis/*genetics, Alcaligenes/genetics, Cloning, Molecular, Cosmids, Cytoplasmic Granules/ultrastructure, Genetic Complementation Test, Hydroxybutyrates/*metabolism, Nucleic Acid Hybridization, Polyesters/*metabolism, Rhodobacter sphaeroides/enzymology/*genetics, Rhodospirillum rubrum/enzymology/*geneticsMetabolism
Pathogenicity1898897Diphosphoryl lipid A derived from lipopolysaccharide (LPS) of Rhodopseudomonas sphaeroides inhibits activation of 70Z/3 cells by LPS.Kirkland TN, Qureshi N, Takayama KInfect Immun10.1128/iai.59.1.131-136.19911991Animals, B-Lymphocytes/*drug effects/immunology, Hematopoietic Stem Cells/*drug effects, Immunoglobulin kappa-Chains/genetics, Lipid A/*analogs & derivatives/pharmacology, Lipopolysaccharides/*antagonists & inhibitors, Lymphocyte Activation/*drug effects, Mice, RNA, Messenger/analysis, Receptors, Antigen, B-Cell/analysis, Rhodobacter sphaeroides/*metabolism, Structure-Activity RelationshipMetabolism
1987057Diphosphoryl lipid A obtained from the nontoxic lipopolysaccharide of Rhodopseudomonas sphaeroides is an endotoxin antagonist in mice.Qureshi N, Takayama K, Kurtz RInfect Immun10.1128/iai.59.1.441-444.19911991Animals, Interleukin-1/biosynthesis, Lipid A/*analogs & derivatives/pharmacology, Lipopolysaccharides/*antagonists & inhibitors, Mice, Mice, Inbred C3H, Rhodobacter sphaeroides/*analysis, Tumor Necrosis Factor-alpha/biosynthesis
Metabolism2007601Chemical reduction of 3-oxo and unsaturated groups in fatty acids of diphosphoryl lipid A from the lipopolysaccharide of Rhodopseudomonas sphaeroides. Comparison of biological properties before and after reduction.Qureshi N, Takayama K, Meyer KC, Kirkland TN, Bush CA, Chen L, Wang R, Cotter RJJ Biol ChemS0021-9258(18)38150-X1991Catalysis, Chromatography, Gas, Chromatography, High Pressure Liquid, Escherichia coli/metabolism, Fatty Acids, Unsaturated/*chemistry, Lipid A/*analogs & derivatives/chemistry, Lipopolysaccharides/*chemistry, Magnetic Resonance Spectroscopy, Mass Spectrometry, Models, Molecular, Oxidation-Reduction, Rhodobacter sphaeroides/*metabolism
Pathogenicity2784418Diphosphoryl lipid A from Rhodopseudomonas sphaeroides ATCC 17023 blocks induction of cachectin in macrophages by lipopolysaccharide.Takayama K, Qureshi N, Beutler B, Kirkland TNInfect Immun10.1128/iai.57.4.1336-1338.19891989Animals, Lipid A/*analogs & derivatives/physiology, Lipopolysaccharides/*pharmacology, Macrophages/drug effects/*metabolism/microbiology, Mice, Rhodobacter sphaeroides/*physiology, Tumor Necrosis Factor-alpha/*antagonists & inhibitors/biosynthesisMetabolism
2986691Soluble cytochrome composition of the purple phototrophic bacterium, Rhodopseudomonas sphaeroides ATCC 17023.Meyer TE, Cusanovich MABiochim Biophys Acta10.1016/0005-2728(85)90263-41985*Bacterial Proteins, Cytochrome b Group/analysis, Cytochrome c Group/analysis, Cytochromes/*analysis/genetics, Cytochromes c2, Hemeproteins/analysis, *NADPH Oxidases, Rhodobacter sphaeroides/*analysis/genetics, Solubility
3258599Location of fatty acids in lipid A obtained from lipopolysaccharide of Rhodopseudomonas sphaeroides ATCC 17023.Qureshi N, Honovich JP, Hara H, Cotter RJ, Takayama KJ Biol ChemS0021-9258(18)60592-71988Chemical Phenomena, Chemistry, Chromatography, Chromatography, High Pressure Liquid, Fatty Acids/*analysis, Lipid A/*analysis, Lipopolysaccharides/*analysis, Mass Spectrometry, Molecular Conformation, Rhodobacter sphaeroides/*analysis
Enzymology6333338The structure of the polysaccharide moiety of Rhodopseudomonas sphaeroides ATCC 17023 lipopolysaccharide.Salimath PV, Tharanathan RN, Weckesser J, Mayer HEur J Biochem10.1111/j.1432-1033.1984.tb08454.x1984Chemical Phenomena, Chemistry, Dansyl Compounds, Gas Chromatography-Mass Spectrometry, Hydrolysis, Lipopolysaccharides/*isolation & purification, Methylation, Oligosaccharides/analysis, Rhodobacter sphaeroides/*analysisPhylogeny
Phylogeny6602801Nontoxic lipopolysaccharide from Rhodopseudomonas sphaeroides ATCC 17023.Strittmatter W, Weckesser J, Salimath PV, Galanos CJ Bacteriol10.1128/jb.155.1.153-158.19831983Carbohydrates/analysis, Lipopolysaccharides/*isolation & purification, Mass Spectrometry, Rhodobacter sphaeroides/*analysis, Salmonella/analysis, Serotyping, Species SpecificityEnzymology
Enzymology6604629Structural studies on the non-toxic lipid A from Rhodopseudomonas sphaeroides ATCC 17023.Salimath PV, Weckesser J, Strittmatter W, Mayer HEur J Biochem10.1111/j.1432-1033.1983.tb07726.x1983Chemical Phenomena, Chemistry, Chromatography/methods, Fatty Acids/analysis, Lipids/*isolation & purification, Mass Spectrometry, Phosphates/analysis, Rhodobacter sphaeroides/*analysis, Structure-Activity RelationshipPhylogeny
Metabolism6970593Low temperature excitation and emission spectroscopy of the photosynthetic bacteria Rhodopseudomonas sphaeroides 'wild-type' strain ATCC 17023.Kaiser GH, Beck J, von Schutz JU, Wolf HCBiochim Biophys Acta10.1016/0005-2728(81)90135-31981Bacteriochlorophylls/metabolism, Freezing, Kinetics, *Photosynthesis, Pigments, Biological/metabolism, Protoporphyrins/metabolism, Rhodobacter sphaeroides/*metabolism, Spectrometry, Fluorescence, SpectrophotometryEnzymology
Enzymology6978883Nitrate reductase from Rhodopseudomonas sphaeroides.Kerber NL, Cardenas JJ Bacteriol10.1128/jb.150.3.1091-1097.19821982Iron/pharmacology, Light, Molybdenum/pharmacology, Nitrate Reductases/*metabolism, Nitrates/metabolism, Nitrites/metabolism, Oxidation-Reduction, Oxygen/pharmacology, *Potassium Compounds, Rhodobacter sphaeroides/*enzymology/growth & developmentMetabolism
Enzymology7812271Diphosphoryl lipid A derived from the lipopolysaccharide (LPS) of Rhodobacter sphaeroides ATCC 17023 is a potent competitive LPS inhibitor in murine macrophage-like J774.1 cells.Kirikae T, Schade FU, Kirikae F, Qureshi N, Takayama K, Rietschel ETFEMS Immunol Med Microbiol10.1111/j.1574-695X.1994.tb00499.x1994Animals, Binding, Competitive, Cell Line, Interleukin-6/immunology, Lipid A/*analogs & derivatives/immunology/isolation & purification, Lipopolysaccharides/chemistry/*immunology, Macrophages/*immunology, Mice, Rhodobacter sphaeroides/*immunology, Tumor Necrosis Factor-alpha/immunologyPhylogeny
Enzymology8487309New crystal form of the photosynthetic reaction centre from Rhodobacter sphaeroides of improved diffraction quality.Buchanan SK, Fritzsch G, Ermler U, Michel HJ Mol Biol10.1006/jmbi.1993.12461993Crystallization, Membrane Proteins/*chemistry/isolation & purification, Photosynthetic Reaction Center Complex Proteins/*chemistry/isolation & purification, Rhodobacter sphaeroides/*chemistry, X-Ray DiffractionPhylogeny
Enzymology8730872Isolation of periplasmic nitrate reductase genes from Rhodobacter sphaeroides DSM 158: structural and functional differences among prokaryotic nitrate reductases.Reyes F, Roldan MD, Klipp W, Castillo F, Moreno-Vivian CMol Microbiol10.1111/j.1365-2958.1996.tb02475.x1996Amino Acid Sequence, Base Sequence, Cloning, Molecular, DNA, Bacterial/genetics, Gene Expression, *Genes, Bacterial, Molecular Sequence Data, Molecular Structure, Mutation, Nitrate Reductase, Nitrate Reductases/chemistry/*genetics/metabolism, Oxygen/pharmacology, Quaternary Ammonium Compounds/pharmacology, Restriction Mapping, Rhodobacter sphaeroides/*enzymology/*genetics, Sequence Homology, Amino AcidGenetics
8952944The effect of different levels of the B800-850 light-harvesting complex on intracytoplasmic membrane development in Rhodobacter sphaeroidesSturgis JN, Niedermann RAArch Microbiol10.1007/s0020300503211996
Enzymology9370368Molecular characterisation of the pifC gene encoding translation initiation factor 3, which is required for normal photosynthetic complex formation in Rhodobacter sphaeroides NCIB 8253.Babic S, Hunter CN, Rakhlin NJ, Simons RW, Phillips-Jones MKEur J Biochem10.1111/j.1432-1033.1997.t01-1-00564.x1997Amino Acid Sequence, Bacterial Proteins/*biosynthesis/*genetics/isolation & purification, Base Sequence, Cloning, Molecular, Escherichia coli/genetics/metabolism, Eukaryotic Initiation Factor-3, *Genes, Plant, Genotype, Molecular Sequence Data, Peptide Initiation Factors/*biosynthesis/*genetics/isolation & purification, *Photosynthesis, Recombinant Fusion Proteins/biosynthesis, Restriction Mapping, Rhodobacter sphaeroides/*genetics/*metabolism, Sequence Alignment, Sequence Homology, Amino Acid, beta-Galactosidase/biosynthesisGenetics
Genetics9560320Periplasmic nitrate-reducing system of the phototrophic bacterium Rhodobacter sphaeroides DSM 158: transcriptional and mutational analysis of the napKEFDABC gene cluster.Reyes F, Gavira M, Castillo F, Moreno-Vivian CBiochem J10.1042/bj33108971998Amino Acid Sequence, Bacterial Proteins/chemistry, Cloning, Molecular, DNA Mutational Analysis, Electron Transport/physiology, Gene Expression Regulation, Enzymologic/genetics, Genes, Bacterial/genetics, Molecular Sequence Data, Mutagenesis, Insertional/genetics, Nitrate Reductase, Nitrate Reductases/*chemistry/genetics, Paraquat/metabolism, Periplasm/*enzymology, Promoter Regions, Genetic/genetics, Restriction Mapping, Rhodobacter sphaeroides/*metabolism, Sequence Analysis, DNA, Sequence Homology, Amino Acid, Transcription, Genetic/geneticsEnzymology
Enzymology9575236Purification and characterization of a catalase from the nonsulfur phototrophic bacterium Rhodobacter sphaeroides ATH 2.4.1 and its role in the oxidative stress response.Terzenbach DP, Blaut MArch Microbiol10.1007/s0020300506031998Amino Acid Sequence, Bacterial Proteins/chemistry/classification/genetics/*isolation & purification, Catalase/chemistry/genetics/*isolation & purification, Electrophoresis, Polyacrylamide Gel, Enzyme Inhibitors/pharmacology, Hydrogen-Ion Concentration, Molecular Sequence Data, Oxidative Stress/physiology, Rhodobacter sphaeroides/*enzymology/growth & development, Sequence Analysis, Spectrum AnalysisPhylogeny
Metabolism11872721Regulation of nap gene expression and periplasmic nitrate reductase activity in the phototrophic bacterium Rhodobacter sphaeroides DSM158.Gavira M, Roldan MD, Castillo F, Moreno-Vivian CJ Bacteriol10.1128/JB.184.6.1693-1702.20022002*Arabidopsis Proteins, Dose-Response Relationship, Drug, Enzyme Activation, Gene Expression Regulation, Bacterial, Genes, Bacterial, Multigene Family, Nitrate Reductase, Nitrate Reductases/*metabolism, Nitrates/pharmacology, Nitrites/pharmacology, Periplasm/metabolism, Plant Proteins/genetics/*metabolism, Protein Biosynthesis, Quaternary Ammonium Compounds/pharmacology, Recombinant Fusion Proteins/metabolism, Rhodobacter sphaeroides/growth & development/*metabolism, Transcription, GeneticEnzymology
Phylogeny12508853Farnesyl diphosphate synthase gene of three phototrophic bacteria and its use as a phylogenetic marker.Cantera JJL, Kawasaki H, Seki TInt J Syst Evol Microbiol10.1099/00207713-52-6-19532002Alkyl and Aryl Transferases/*genetics, Alphaproteobacteria/classification/*enzymology/*genetics, Amino Acid Sequence, Base Sequence, DNA, Bacterial/genetics, *Genes, Bacterial, Genetic Markers, Geranyltranstransferase, Molecular Sequence Data, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Rhodobacter capsulatus/classification/*enzymology/*genetics, Rhodobacter sphaeroides/classification/*enzymology/*genetics, Sequence Homology, Amino Acid, Species SpecificityEnzymology
Metabolism15371424NapF is a cytoplasmic iron-sulfur protein required for Fe-S cluster assembly in the periplasmic nitrate reductase.Olmo-Mira MF, Gavira M, Richardson DJ, Castillo F, Moreno-Vivian C, Roldan MDJ Biol Chem10.1074/jbc.M4065022002004Amino Acid Sequence, Iron/*metabolism, Molecular Sequence Data, Nitrate Reductase, Nitrate Reductases/*metabolism, Periplasmic Proteins/*metabolism, Rhodobacter sphaeroides/enzymology/metabolism, Sequence Alignment, Sequence Analysis, Protein, Spectrophotometry, Sulfur/*metabolism, Time FactorsEnzymology
Metabolism16684526Redox-responsive in vitro modulation of the signalling state of the isolated PrrB sensor kinase of Rhodobacter sphaeroides NCIB 8253.Potter CA, Jeong EL, Williamson MP, Henderson PJ, Phillips-Jones MKFEBS Lett10.1016/j.febslet.2006.04.0792006Adenosine Monophosphate/pharmacology, Adenosine Triphosphate/pharmacology, Bacterial Proteins/*metabolism, Dithiothreitol/pharmacology, Energy Metabolism, NAD/pharmacology, Oxidation-Reduction, Phosphorylation, Protein Kinases/*metabolism, Rhodobacter sphaeroides/drug effects/*enzymology, Signal TransductionEnzymology
Phylogeny18676458Rhodobacter megalophilus sp. nov., a phototroph from the Indian Himalayas possessing a wide temperature range for growth.Arunasri K, Venkata Ramana V, Sproer C, Sasikala Ch, Ramana ChVInt J Syst Evol Microbiol10.1099/ijs.0.65642-02008*Altitude, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/analysis, DNA, Ribosomal/analysis, Fourier Analysis, Genes, rRNA, Genotype, India, Molecular Sequence Data, Nucleic Acid Hybridization, Phenotype, *Phototrophic Processes, Phylogeny, RNA, Ribosomal, 16S/genetics, Rhodobacter/*classification/genetics/*growth & development/isolation & purification, Sequence Analysis, DNA, *Soil Microbiology, Species Specificity, TemperatureGenetics
Phylogeny19854875Rhodobacter johrii sp. nov., an endospore-producing cryptic species isolated from semi-arid tropical soils.Girija KR, Sasikala C, Ramana CV, Sproer C, Takaichi S, Thiel V, Imhoff JFInt J Syst Evol Microbiol10.1099/ijs.0.011718-02009DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Molecular Sequence Data, Phylogeny, Plant Roots/microbiology, RNA, Ribosomal, 16S/genetics, Rhodobacter/*classification/genetics/*isolation & purification, *Soil Microbiology, Sorghum/microbiology, Spores, Bacterial/*classification/genetics/*isolation & purificationGenetics
Metabolism20180320Bio-hydrogen production using a two-stage fermentation process.Alalayah WM, Kalil MS, Kadhum AA, Jahim JM, Jaapar SZ, Alauj NMPak J Biol Sci10.3923/pjbs.2009.1462.14672009Acetic Acid/metabolism, Anaerobiosis/physiology, Biofuels/*microbiology, Biomass, Clostridium/metabolism, Darkness, Fermentation/*physiology, Glucose/metabolism, Hydrogen/*metabolism, Hydrogen-Ion Concentration, Light, Rhodobacter sphaeroides/metabolism, Sterilization, TemperatureBiotechnology
Metabolism20384278The effect of aeration, agitation and light on biohydrogen production by Rhodobacter sphaeroides NCIMB 8253.Jaapar SZ, Kalil MS, Anuar NPak J Biol Sci10.3923/pjbs.2009.1253.12592009Fermentation, Hydrogen/*metabolism, Industrial Microbiology, *Light, Oxygen/*metabolism, Rhodobacter sphaeroides/cytology/*metabolismBiotechnology
Stress20544803Effects of ethanol, formaldehyde, and gentle heat fixation in confocal resonance Raman microscopy of purple nonsulfur bacteria.Kniggendorf AK, Gaul TW, Meinhardt-Wollweber MMicrosc Res Tech10.1002/jemt.208892011Ethanol/chemistry, Fixatives/chemistry, Formaldehyde/chemistry, Hot Temperature, Microscopy, Confocal, Rhodospirillaceae/*chemistry/cytology, Spectrum Analysis, Raman, Tissue Fixation/instrumentation/*methods
Metabolism20852980Aniline-induced tryptophan production and identification of indole derivatives from three purple bacteria.Mujahid M, Sasikala Ch, Ramana ChVCurr Microbiol10.1007/s00284-010-9609-22010Aniline Compounds/*metabolism, Betaproteobacteria/*metabolism, Biodegradation, Environmental, Chromatography, High Pressure Liquid, Chromatography, Liquid, Indoleacetic Acids/isolation & purification, Indoles/analysis/isolation & purification/*metabolism, Industrial Waste, Mass Spectrometry, Metabolic Networks and Pathways, Rhodobacter sphaeroides/*metabolism, Rhodospirillum rubrum/*metabolism, Tandem Mass Spectrometry, Tryptophan/*metabolism, ortho-Aminobenzoates/isolation & purificationEnzymology
Phylogeny23104358Falsirhodobacter halotolerans gen. nov., sp. nov., isolated from dry soils of a solar saltern.Subhash Y, Tushar L, Sasikala C, Ramana CVInt J Syst Evol Microbiol10.1099/ijs.0.044107-02012Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/analysis, India, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/analysis, *Phylogeny, RNA, Ribosomal, 16S/genetics, Rhodobacteraceae/*classification/genetics/isolation & purification, Sequence Analysis, DNA, *Soil Microbiology, Triterpenes/analysisGenetics
Metabolism24497982Molecular cloning, overexpression and characterization of a novel water channel protein from Rhodobacter sphaeroides.Erbakan M, Shen YX, Grzelakowski M, Butler PJ, Kumar M, Curtis WRPLoS One10.1371/journal.pone.00868302014Algorithms, Amino Acid Sequence, Aquaporins/classification/genetics/*metabolism, Bacterial Proteins/genetics/*metabolism, Biological Transport, Blotting, Western, Cell Membrane Permeability, Cloning, Molecular, Gene Expression Regulation, Bacterial, Liposomes/metabolism/ultrastructure, Luminescent Proteins/genetics/metabolism, Microscopy, Electron, Models, Biological, Molecular Sequence Data, Phylogeny, Recombinant Proteins/*metabolism, Rhodobacter sphaeroides/genetics/*metabolism, Sequence Homology, Amino Acid, Water/metabolismPhylogeny
Metabolism25459807Hydrogen production by Rhodobacter sphaeroides DSM 158 under intense irradiation.Krujatz F, Hartel P, Helbig K, Haufe N, Thierfelder S, Bley T, Weber JBioresour Technol10.1016/j.biortech.2014.10.0612014Biomass, Hydrogen/*metabolism, Photobioreactors/*microbiology, Rhodobacter sphaeroides/*metabolismBiotechnology
Metabolism26037711Light-field-characterization in a continuous hydrogen-producing photobioreactor by optical simulation and computational fluid dynamics.Krujatz F, Illing R, Krautwer T, Liao J, Helbig K, Goy K, Opitz J, Cuniberti G, Bley T, Weber JBiotechnol Bioeng10.1002/bit.256672015*Chemical Phenomena, *Hydrodynamics, Hydrogen/*metabolism, *Light, Photobioreactors/*microbiology, Rhodobacter sphaeroides/*growth & development/*metabolism
Biotechnology26875086Optimization of Biomass and 5-Aminolevulinic Acid Production by Rhodobacter sphaeroides ATCC17023 via Response Surface Methodology.Liu S, Zhang G, Li J, Li X, Zhang JAppl Biochem Biotechnol10.1007/s12010-016-2005-z2016Aminolevulinic Acid/chemistry/*metabolism, *Biomass, Fatty Acids, Volatile/chemistry/*pharmacology, Gene Expression Regulation, Bacterial, Porphobilinogen Synthase/chemistry, Rhodobacter sphaeroides/chemistry/drug effects/growth & development, Surface Properties, Waste Water/chemistryMetabolism
Metabolism34717624Improving CoQ10 productivity by strengthening glucose transmembrane of Rhodobacter sphaeroides.Yang Y, Li L, Sun H, Li Z, Qi Z, Liu XMicrob Cell Fact10.1186/s12934-021-01695-z2021Bacterial Proteins/genetics/*metabolism, Biological Transport, Biomass, Calcium-Binding Proteins/genetics/metabolism, Escherichia coli Proteins/genetics, Fermentation, Glucokinase/genetics/metabolism, Glucose/*metabolism, Industrial Microbiology, *Metabolic Engineering, Monosaccharide Transport Proteins/genetics/metabolism, Mutation, Periplasmic Binding Proteins/genetics/metabolism, Protein Kinases/genetics, Rhodobacter sphaeroides/genetics/*metabolism, Ubiquinone/*analogs & derivatives/biosynthesisBiotechnology
36363789Effects of Seed Bio-Priming by Purple Non-Sulfur Bacteria (PNSB) on the Root Development of Rice.Iwai R, Uchida S, Yamaguchi S, Sonoda F, Tsunoda K, Nagata H, Nagata D, Koga A, Goto M, Maki TA, Hayashi S, Yamamoto S, Miyasaka HMicroorganisms10.3390/microorganisms101121972022

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
2125Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 158)https://www.dsmz.de/collection/catalogue/details/culture/DSM-158
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
36213Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/9817
50618Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 31486)https://www.ccug.se/strain?id=31486
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg10.1093/nar/gkaa1025BRENDA, the ELIXIR core data resource in 2021: new developments and updatesNucleic Acids Res. 49: D498-D508 202033211880
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)