Strain identifier

BacDive ID: 137841

Type strain: No

Species: Gemella haemolysans

Strain Designation: 868.84

Strain history: CIP <- 1984, Lab. Ident. Inst. Pasteur, Paris, France: strain 868.84 <- Poissy Hosp., Poissy, France

NCBI tax ID(s): 1379 (species)

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General

@ref: 38787

BacDive-ID: 137841

keywords: Bacteria, facultative anaerobe, Gram-positive, ovoid-shaped

description: Gemella haemolysans 868.84 is a facultative anaerobe, Gram-positive, ovoid-shaped bacterium of the family Gemellaceae.

NCBI tax id

  • NCBI tax id: 1379
  • Matching level: species

strain history

  • @ref: 38787
  • history: CIP <- 1984, Lab. Ident. Inst. Pasteur, Paris, France: strain 868.84 <- Poissy Hosp., Poissy, France

doi: 10.13145/bacdive137841.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Gemellaceae
  • genus: Gemella
  • species: Gemella haemolysans
  • full scientific name: Gemella haemolysans (Thjøtta and Bøe 1938) Berger 1960 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Neisseria haemolysans

@ref: 38787

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Caryophanales, not assigned to family

genus: Gemella

species: Gemella haemolysans

strain designation: 868.84

type strain: no

Morphology

cell morphology

  • @ref: 38787
  • gram stain: positive
  • cell shape: ovoid-shaped
  • motility: no

colony morphology

  • @ref: 38787
  • hemolysis ability: 1

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
38787MEDIUM 6 - Columbia agar with 10 % horse bloodyesDistilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
38787CIP Medium 253yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=253
38787CIP Medium 6yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=6
38787CIP Medium 38yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=38

culture temp

@refgrowthtypetemperature
38787positivegrowth37
38787positivegrowth25-41
38787nogrowth10
38787nogrowth45

Physiology and metabolism

oxygen tolerance

  • @ref: 38787
  • oxygen tolerance: facultative anaerobe

halophily

  • @ref: 38787
  • salt: NaCl
  • growth: no
  • tested relation: growth
  • concentration: 6.5 %

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 2-ketogluconate-builds acid from
68371gluconate-builds acid from24265
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose+builds acid from32528
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen+builds acid from28087
68371starch+builds acid from28017
68371raffinose-builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371trehalose-builds acid from27082
68371sucrose+builds acid from17992
68371melibiose-builds acid from28053
68371lactose-builds acid from17716
68371maltose+builds acid from17306
68371cellobiose-builds acid from17057
68371salicin-builds acid from17814
68371esculin-builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine+builds acid from59640
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371D-mannitol-builds acid from16899
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-fructose+builds acid from15824
68371D-glucose+builds acid from17634
68371D-galactose-builds acid from12936
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose-builds acid from65327
68371D-ribose-builds acid from16988
68371L-arabinose-builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
68371glycerol-builds acid from17754
38787esculin-hydrolysis4853
38787hippurate+hydrolysis606565
38787nitrate+reduction17632
38787nitrite+reduction16301

metabolite tests

  • @ref: 38787
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: -

enzymes

@refvalueactivityec
38787oxidase-
38787beta-galactosidase-3.2.1.23
38787alcohol dehydrogenase-1.1.1.1
38787catalase-1.11.1.6
38787gamma-glutamyltransferase-2.3.2.2
38787lysine decarboxylase-4.1.1.18
38787ornithine decarboxylase-4.1.1.17
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin+3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
38787-+++-----+++--------

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
38787----------+++/---------+-----+--+----++--+--------+/-

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typeisolation date
38787PoissyFranceFRAEurope
38787PoissyFranceFRAEuropeHuman, Spinal fluid, child1984

Safety information

risk assessment

  • @ref: 38787
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 38787

culture collection no.: CIP 101215

straininfo link

  • @ref: 94657
  • straininfo: 68631

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
38787Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20101215Collection of Institut Pasteur (CIP 101215)
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
94657Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID68631.1