Strain identifier
BacDive ID: 137422
Type strain: 
Species: Acinetobacter sp.
Strain history: CIP <- 2012, A. Nemec, Inst. Pasteur, Paris, France: strain NIPH 298
NCBI tax ID(s): 1217692 (species)
version 8.1 (current version)
General
@ref: 37936
BacDive-ID: 137422
keywords: genome sequence, Bacteria, mesophilic, Gram-negative
description: Acinetobacter sp. CIP 110452 is a mesophilic, Gram-negative bacterium of the family Moraxellaceae.
NCBI tax id
- NCBI tax id: 1217692
- Matching level: species
strain history
| @ref | history |
|---|---|
| 37936 | 2012, A. Nemec, Inst. Pasteur, Paris, France: strain NIPH 298 |
| 37936 | CIP <- 2012, A. Nemec, Inst. Pasteur, Paris, France: strain NIPH 298 |
doi: 10.13145/bacdive137422.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Moraxellaceae
- genus: Acinetobacter
- species: Acinetobacter sp.
- full scientific name: Acinetobacter Brisou and Prévot 1954 (Approved Lists 1980)
@ref: 37936
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Moraxellaceae
genus: Acinetobacter
species: Acinetobacter sp.
type strain: no
Morphology
cell morphology
| @ref | gram stain | confidence | cell shape | motility |
|---|---|---|---|---|
| 69480 | negative | 99.986 | ||
| 37936 | negative | oval-shaped | no |
Culture and growth conditions
culture medium
| @ref | name | growth | composition | link |
|---|---|---|---|---|
| 37936 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |
| 37936 | CIP Medium 72 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72 |
culture temp
- @ref: 37936
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69481 | no | 100 |
| 69480 | no | 99.995 |
Isolation, sampling and environmental information
isolation
| @ref | geographic location | country | origin.country | continent | sample type | isolation date |
|---|---|---|---|---|---|---|
| 37936 | Pfibram | Czech Republic | CZE | Europe | ||
| 37936 | Pfibram | Czech Republic | CZE | Europe | Human, Wound | 1994 |
Safety information
risk assessment
- @ref: 37936
- biosafety level: 1
- biosafety level comment: Risk group (French classification)
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Acinetobacter sp. NIPH 298 | 1217692.3 | wgs | patric | 1217692 |
| 66792 | Acinetobacter sp. NIPH 298 | 2565956677 | draft | img | 1217692 |
| 66792 | Acinetobacter sp. NIPH 298 | GCA_000369505 | scaffold | ncbi | 1217692 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 100 | no |
| motile | no | 91.515 | no |
| flagellated | no | 89.785 | no |
| gram-positive | no | 97.951 | no |
| anaerobic | no | 98.21 | no |
| aerobic | yes | 94.653 | no |
| halophile | no | 83.754 | no |
| spore-forming | no | 96.418 | no |
| thermophile | no | 99.873 | yes |
| glucose-util | no | 84.733 | no |
| glucose-ferment | no | 90.393 | no |
External links
@ref: 37936
culture collection no.: CIP 110452, NIPH 298
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 37936 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20110452 | Collection of Institut Pasteur (CIP 110452) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 |