Strain identifier

BacDive ID: 137402

Type strain: No

Species: Vibrio cholerae

Strain Designation: 335

Strain history: CIP <- 2001, D. Mazel, Inst. Pasteur, Paris, France <- A.C P. Vicente: strain 335

NCBI tax ID(s): 666 (species)

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General

@ref: 37687

BacDive-ID: 137402

keywords: Bacteria, facultative anaerobe, Gram-negative, motile, rod-shaped

description: Vibrio cholerae 335 is a facultative anaerobe, Gram-negative, motile bacterium of the family Vibrionaceae.

NCBI tax id

  • NCBI tax id: 666
  • Matching level: species

strain history

  • @ref: 37687
  • history: CIP <- 2001, D. Mazel, Inst. Pasteur, Paris, France <- A.C P. Vicente: strain 335

doi: 10.13145/bacdive137402.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Vibrionales
  • family: Vibrionaceae
  • genus: Vibrio
  • species: Vibrio cholerae
  • full scientific name: Vibrio cholerae Pacini 1854 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Vibrio albensis

@ref: 37687

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Vibrionales

family: Vibrionaceae

genus: Vibrio

species: Vibrio cholerae

strain designation: 335

type strain: no

Morphology

cell morphology

  • @ref: 37687
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
37687MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
37687CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperature
37687positivegrowth20
37687positivegrowth15-41
37687nogrowth5

Physiology and metabolism

oxygen tolerance

  • @ref: 37687
  • oxygen tolerance: facultative anaerobe

halophily

@refsaltgrowthtested relationconcentration
37687NaClpositivegrowth0-8 %
37687NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3768716947citrate+carbon source
376874853esculin-hydrolysis
3768717234glucose+fermentation
3768717716lactose-fermentation
3768717632nitrate+reduction
3768716301nitrite-reduction
37687132112sodium thiosulfate-builds gas from
3768717234glucose+degradation
3768717632nitrate-respiration

antibiotic resistance

  • @ref: 37687
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: yes
  • is resistant: no

metabolite production

  • @ref: 37687
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
3768715688acetoin+
3768717234glucose+

enzymes

@refvalueactivityec
37687oxidase+
37687beta-galactosidase+3.2.1.23
37687alcohol dehydrogenase-1.1.1.1
37687gelatinase+
37687amylase+
37687DNase+
37687caseinase-3.4.21.50
37687catalase+1.11.1.6
37687tween esterase+
37687gamma-glutamyltransferase+2.3.2.2
37687lecithinase+
37687lipase+
37687lysine decarboxylase+4.1.1.18
37687ornithine decarboxylase+4.1.1.17
37687phenylalanine ammonia-lyase-4.3.1.24
37687protease+
37687tryptophan deaminase-
37687urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase+3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
37687-+++++++--++-+-+-+--

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
37687+++++--+-++------+-+-----------+-+---------------++--+-----++--------------+---++-+---+--++++-+---+

Isolation, sampling and environmental information

isolation

@refcountryorigin.countrycontinentsample typeisolation date
37687Czech RepublicCZEEurope
37687Czech RepublicCZEEuropeHuman1965

Safety information

risk assessment

  • @ref: 37687
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 37687

culture collection no.: CIP 106974

straininfo link

  • @ref: 94306
  • straininfo: 101578

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
37687Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20106974Collection of Institut Pasteur (CIP 106974)
68382Automatically annotated from API zym
94306Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID101578.1