Strain identifier
BacDive ID: 137393
Type strain: 
Species: Shigella dysenteriae
Strain Designation: Bucarest S
Strain history: CIP <- 1955, Mesrobeanu, Bucarest, Rumania: strain Bucarest S
NCBI tax ID(s): 622 (species)
version 8.1 (current version)
General
@ref: 37672
BacDive-ID: 137393
keywords: genome sequence, Bacteria, mesophilic
description: Shigella dysenteriae Bucarest S is a mesophilic bacterium of the family Enterobacteriaceae.
NCBI tax id
- NCBI tax id: 622
- Matching level: species
strain history
| @ref | history |
|---|---|
| 37672 | 1955, Mesrobeanu, Bucarest, Rumania: strain Bucarest S |
| 37672 | CIP <- 1955, Mesrobeanu, Bucarest, Rumania: strain Bucarest S |
doi: 10.13145/bacdive137393.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Enterobacteriaceae
- genus: Shigella
- species: Shigella dysenteriae
- full scientific name: Shigella dysenteriae (Shiga 1897) Castellani and Chalmers 1919 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacillus dysentericus
@ref: 37672
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacterales
family: Enterobacteriaceae
genus: Shigella
species: Shigella dysenteriae
strain designation: Bucarest S
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | composition | link |
|---|---|---|---|---|
| 37672 | MEDIUM 3 - Columbia agar | yes | Columbia agar (39.000 g);distilled water (1000.000 ml) | |
| 37672 | CIP Medium 3 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3 |
culture temp
- @ref: 37672
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
| @ref | geographic location | country | origin.country | continent | isolation date |
|---|---|---|---|---|---|
| 37672 | Bucarest | Romania | ROU | Europe | |
| 37672 | Bucharest | Romania | ROU | Europe | 1955 |
Safety information
risk assessment
- @ref: 37672
- biosafety level: 3
- biosafety level comment: Risk group (French classification)
Sequence information
Genome sequences
- @ref: 66792
- description: Shigella dysenteriae strain CIP55.137
- accession: 622.107
- assembly level: wgs
- database: patric
- NCBI tax ID: 622
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| gram-positive | no | 97.968 | no |
| anaerobic | no | 94.867 | no |
| halophile | no | 91.107 | no |
| spore-forming | no | 94.672 | no |
| glucose-util | yes | 90.695 | no |
| thermophile | no | 99.095 | yes |
| flagellated | no | 90.292 | no |
| motile | no | 52.434 | no |
| aerobic | yes | 74.322 | no |
| glucose-ferment | yes | 92.248 | no |
External links
@ref: 37672
culture collection no.: CIP 55.137
straininfo link
- @ref: 94299
- straininfo: 70118
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 37672 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2055.137 | Collection of Institut Pasteur (CIP 55.137) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 94299 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID70118.1 |