Strain identifier
BacDive ID: 137064
Type strain: 
Species: Serratia nematodiphila
Strain history: CIP <- 1953, ATCC <- R.S. Breed, New York Agr. Exp. Stat., USA: strain K5, Serratia indica <- 1904, Kràl Collection, Vienna, Austria <- R. Koch
NCBI tax ID(s): 615 (species)
General
@ref: 36911
BacDive-ID: 137064
keywords: Bacteria, mesophilic, Gram-negative, rod-shaped
description: Serratia nematodiphila CIP 53.98 is a mesophilic, Gram-negative, rod-shaped bacterium of the family Yersiniaceae.
NCBI tax id
- NCBI tax id: 615
- Matching level: species
strain history
- @ref: 36911
- history: CIP <- 1953, ATCC <- R.S. Breed, New York Agr. Exp. Stat., USA: strain K5, Serratia indica <- 1904, Kràl Collection, Vienna, Austria <- R. Koch
doi: 10.13145/bacdive137064.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Yersiniaceae
- genus: Serratia
- species: Serratia nematodiphila
- full scientific name: Serratia nematodiphila Zhang et al. 2009
@ref: 36911
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacterales
family: Yersiniaceae
genus: Serratia
species: Serratia nematodiphila
type strain: no
Morphology
cell morphology
- @ref: 36911
- gram stain: negative
- cell shape: rod-shaped
- motility: no
Culture and growth conditions
culture medium
| @ref | name | growth | composition | link |
|---|---|---|---|---|
| 36911 | MEDIUM 3 - Columbia agar | yes | Columbia agar (39.000 g);distilled water (1000.000 ml) | |
| 36911 | CIP Medium 72 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72 | |
| 36911 | CIP Medium 3 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3 |
culture temp
- @ref: 36911
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 36911 | 17234 | glucose | - | fermentation |
| 36911 | 17632 | nitrate | + | reduction |
| 36911 | 16301 | nitrite | - | reduction |
metabolite production
- @ref: 36911
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 36911
- Chebi-ID: 15688
- metabolite: acetoin
- voges-proskauer-test: +
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 36911 | oxidase | - | |
| 36911 | beta-galactosidase | + | 3.2.1.23 |
| 36911 | alcohol dehydrogenase | - | 1.1.1.1 |
| 36911 | gelatinase | + | |
| 36911 | lysine decarboxylase | + | 4.1.1.18 |
| 36911 | ornithine decarboxylase | + | 4.1.1.17 |
| 36911 | urease | - | 3.5.1.5 |
Isolation, sampling and environmental information
isolation
| @ref | country | origin.country | continent | sample type | isolation date |
|---|---|---|---|---|---|
| 36911 | India | IND | Asia | ||
| 36911 | India | IND | Asia | Animal, Ape, gut | 1884 |
Safety information
risk assessment
- @ref: 36911
- biosafety level: 1
- biosafety level comment: Risk group (French classification)
External links
@ref: 36911
culture collection no.: CIP 53.98, ATCC 4002, IFO 3759, NCTC 2847, NCIMB 2847
straininfo link
- @ref: 94041
- straininfo: 92429
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 36911 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2053.98 | Collection of Institut Pasteur (CIP 53.98) | |
| 94041 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID92429.1 |