Strain identifier

BacDive ID: 136947

Type strain: Yes

Species: Moorella thermoacetica

Strain history: CIP <- 2004, J.P. Carlier, Inst. Pasteur, Paris, France: strain AIP 98-04 <- DSMZ

NCBI tax ID(s): 1122242 (strain), 1525 (species)

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General

@ref: 36735

BacDive-ID: 136947

DSM-Number: 1974

keywords: genome sequence, 16S sequence, Bacteria, anaerobe, spore-forming, thermophilic, motile

description: Moorella thermoacetica CIP 108447 is an anaerobe, spore-forming, thermophilic bacterium of the family Thermoanaerobacteraceae.

NCBI tax id

NCBI tax idMatching level
1122242strain
1525species

strain history

  • @ref: 36735
  • history: CIP <- 2004, J.P. Carlier, Inst. Pasteur, Paris, France: strain AIP 98-04 <- DSMZ

doi: 10.13145/bacdive136947.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Thermoanaerobacterales
  • family: Thermoanaerobacteraceae
  • genus: Moorella
  • species: Moorella thermoacetica
  • full scientific name: Moorella thermoacetica (Fontaine et al. 1942) Collins et al. 1994

  • synonyms

    @refsynonym
    20215Clostridium thermaceticum
    20215Moorella thermoautotrophica
    20215Clostridium thermoautotrophicum
    20215Clostridium thermoaceticum
    20215Clostridium thermautotrophicum

@ref: 36735

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Thermoanaerobacterales

family: Thermoanaerobacteraceae

genus: Moorella

species: Moorella thermoautotrophica

type strain: yes

Morphology

cell morphology

@refmotilityconfidencegram staincell shape
69480yes95.832
69480100positive
36735nopositiverod-shaped

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
36735MEDIUM 224 - for anaerobic bacteria TGVyesDistilled water make up to (1000.000 ml);Glucose (10.000 g);Yeast extract (20.000 g);Resazurin (2.000 mg);Trypto casein soy broth (30.000 g);L-Cysteine (0.500 g);Hemin solution - M00149 (25.000 ml);Vitamins solution - M00850 (10.000 ml)
36735CIP Medium 20yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=20

culture temp

@refgrowthtypetemperaturerangeconfidence
36735positivegrowth55thermophilic
69480thermophilic99.999

Physiology and metabolism

oxygen tolerance

@refoxygen toleranceconfidence
69480anaerobe98.93
36735anaerobe

spore formation

  • @ref: 69480
  • spore formation: yes
  • confidence: 100

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
367354853esculin-hydrolysis
3673517632nitrate+respiration

enzymes

  • @ref: 36735
  • value: beta-galactosidase
  • activity: -
  • ec: 3.2.1.23

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typeisolation date
36735Yellowstone Natl. ParkUSAUSANorth America
36735Yellowstone Natlonal ParkUnited States of AmericaUSANorth AmericaEnvironment, Mud and water from hot spring1981

taxonmaps

  • @ref: 69479
  • File name: preview.99_94.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15934;96_75;97_78;98_85;99_94&stattab=map
  • Last taxonomy: Moorella thermoacetica
  • 16S sequence: L09168
  • Sequence Identity:
  • Total samples: 595
  • soil counts: 87
  • aquatic counts: 257
  • animal counts: 219
  • plant counts: 32

Safety information

risk assessment

  • @ref: 36735
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

Sequence information

16S sequences

  • @ref: 36735
  • description: Clostridium thermoautotrophicum (DSM 1974) 16S ribosomal RNA (16S rRNA) gene
  • accession: L09168
  • length: 1553
  • database: ena
  • NCBI tax ID: 1560

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Moorella thermoacetica strain ATCC 339241525.22wgspatric1525
66792Moorella thermoacetica ATCC 33924GCA_008121895contigncbi1525

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno66no
motileyes91.339no
gram-positiveno70.771no
anaerobicyes99.186no
aerobicno96.743no
halophileno95.43no
spore-formingyes92.78no
glucose-utilyes86.551no
flagellatedno92.715no
thermophileyes100yes
glucose-fermentno69.015no

External links

@ref: 36735

culture collection no.: CIP 108447, DSM 1974, ATCC 33924, AIP 98-04

straininfo link

  • @ref: 93955
  • straininfo: 47518

literature

  • Pubmed-ID: 32010113
  • title: Genome-Based Comparison of All Species of the Genus Moorella, and Status of the Species Moorella thermoacetica and Moorella thermoautotrophica.
  • authors: Redl S, Poehlein A, Esser C, Bengelsdorf FR, Jensen TO, Jendresen CB, Tindall BJ, Daniel R, Durre P, Nielsen AT
  • journal: Front Microbiol
  • DOI: 10.3389/fmicb.2019.03070
  • year: 2020

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
36735Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20108447Collection of Institut Pasteur (CIP 108447)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
93955Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID47518.1