Strain identifier
BacDive ID: 13680
Type strain: 
Species: Marinovum algicola
Strain Designation: ML4
Strain history: <- ATCC <- M. J. Gauthier, ML4 <- C. Rausch de Traubenberg
NCBI tax ID(s): 42444 (species)
version 8.1 (current version)
General
@ref: 3872
BacDive-ID: 13680
DSM-Number: 10252
keywords: 16S sequence, Bacteria, mesophilic
description: Marinovum algicola ML4 is a mesophilic bacterium that was isolated from surface of marine dinoflagellate .
NCBI tax id
- NCBI tax id: 42444
- Matching level: species
strain history
- @ref: 3872
- history: <- ATCC <- M. J. Gauthier, ML4 <- C. Rausch de Traubenberg
doi: 10.13145/bacdive13680.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Rhodobacterales
- family: Roseobacteraceae
- genus: Marinovum
- species: Marinovum algicola
- full scientific name: Marinovum algicola (Lafay et al. 1995) Martens et al. 2006
synonyms
@ref synonym 20215 Roseobacter algicola 20215 Ruegeria algicola
@ref: 3872
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhodobacterales
family: Rhodobacteraceae
genus: Marinovum
species: Marinovum algicola
full scientific name: Marinovum algicola (Lafay et al. 1995) Martens et al. 2006
strain designation: ML4
type strain: no
Culture and growth conditions
culture medium
- @ref: 3872
- name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514
- composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
culture temp
- @ref: 3872
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 3872
- sample type: surface of marine dinoflagellate (Prorocentrum lima)
- host species: Prorocentrum lima
- country: Spain
- origin.country: ESP
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Marine |
| #Host | #Protozoa | #Dinoflagellate |
taxonmaps
- @ref: 69479
- File name: preview.99_5000.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_19;96_2447;97_2982;98_3737;99_5000&stattab=map
- Last taxonomy: Marinovum algicola
- 16S sequence: X78313
- Sequence Identity:
- Total samples: 927
- soil counts: 24
- aquatic counts: 785
- animal counts: 114
- plant counts: 4
Safety information
risk assessment
- @ref: 3872
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Marinovum algicola strain DSM 10252 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence | FJ345304 | 1184 | ena | 42444 |
| 20218 | Marinovum algicola strain DSM 10252 16S ribosomal RNA gene, partial sequence | FJ752525 | 1454 | ena | 42444 |
| 20218 | R.algocolus (ATCC 51441-ML4) gene for 16S ribosomal RNA | X78313 | 1339 | ena | 42444 |
External links
@ref: 3872
culture collection no.: DSM 10252, ATCC 51441
straininfo link
- @ref: 82863
- straininfo: 42984
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 3872 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 10252) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-10252 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 82863 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID42984.1 | StrainInfo: A central database for resolving microbial strain identifiers |