Strain identifier

BacDive ID: 136599

Type strain: No

Species: Niallia circulans

Strain history: CIP <- 1952, Lab. Ident. Inst. Pasteur, Paris, France

NCBI tax ID(s): 1397 (species)

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General

@ref: 36050

BacDive-ID: 136599

keywords: Bacteria, facultative anaerobe, spore-forming, Gram-positive, motile, rod-shaped

description: Niallia circulans CIP A36 is a facultative anaerobe, spore-forming, Gram-positive bacterium of the family Bacillaceae.

NCBI tax id

  • NCBI tax id: 1397
  • Matching level: species

strain history

@refhistory
360501952, Lab. Ident. Inst. Pasteur, Paris, France
36050CIP <- 1952, Lab. Ident. Inst. Pasteur, Paris, France

doi: 10.13145/bacdive136599.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Niallia
  • species: Niallia circulans
  • full scientific name: Niallia circulans (Jordan 1890) Gupta et al. 2020

  • synonyms

    • @ref: 20215
    • synonym: Bacillus circulans

@ref: 36050

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Bacillaceae

genus: Bacillus

species: Bacillus circulans

type strain: no

Morphology

cell morphology

  • @ref: 36050
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: yes

colony morphology

  • @ref: 36050

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
36050MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
36050CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperature
36050positivegrowth30
36050positivegrowth22-45
36050nogrowth10
36050nogrowth55

culture pH

  • @ref: 36050
  • ability: positive
  • type: growth
  • pH: 6

Physiology and metabolism

oxygen tolerance

  • @ref: 36050
  • oxygen tolerance: facultative anaerobe

spore formation

  • @ref: 36050
  • spore formation: yes

halophily

@refsaltgrowthtested relationconcentration
36050NaClpositivegrowth0-4 %
36050NaClnogrowth6 %
36050NaClnogrowth8 %
36050NaClnogrowth10 %

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose+builds acid from32528
68371xylitol-builds acid from17151
68371glycogen+builds acid from28087
68371starch+builds acid from28017
68371raffinose+builds acid from16634
68371melezitose-builds acid from6731
68371trehalose+builds acid from27082
68371sucrose+builds acid from17992
68371melibiose+builds acid from28053
68371lactose+builds acid from17716
68371maltose+builds acid from17306
68371cellobiose+builds acid from17057
68371salicin+builds acid from17814
68371esculin+builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine+builds acid from59640
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371D-mannitol+builds acid from16899
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose+builds acid from16024
68371D-fructose+builds acid from15824
68371D-glucose+builds acid from17634
68371D-galactose+builds acid from12936
68371methyl beta-D-xylopyranoside+builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose+builds acid from65328
68371D-xylose+builds acid from65327
68371D-ribose+builds acid from16988
68371L-arabinose+builds acid from30849
68371erythritol-builds acid from17113
68371glycerol+builds acid from17754
36050citrate-carbon source16947
36050esculin+hydrolysis4853
36050hippurate+hydrolysis606565
36050nitrate+reduction17632
36050nitrite-reduction16301
36050nitrate+respiration17632

metabolite production

  • @ref: 36050
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
3605015688acetoin-
3605017234glucose+

enzymes

@refvalueactivityec
36050oxidase+
36050beta-galactosidase+3.2.1.23
36050alcohol dehydrogenase-1.1.1.1
36050gelatinase-
36050amylase-
36050DNase+
36050caseinase-3.4.21.50
36050catalase+1.11.1.6
36050tween esterase+
36050gamma-glutamyltransferase-2.3.2.2
36050lecithinase-
36050lysine decarboxylase-4.1.1.18
36050ornithine decarboxylase-4.1.1.17
36050urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase+3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase+3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
36050-+++-+-+--+-++-++---

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
36050+-+/-++++-+++++----+---+--+++++++++/--+++-+/-+---+/---+/---

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
36050+++++-+++++++++++++++++-++-----+-+++-----+-----------------++-------------------------+------------

Safety information

risk assessment

  • @ref: 36050
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 36050

culture collection no.: CIP A36

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
36050Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20A36Collection of Institut Pasteur (CIP A36)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym