Strain identifier

BacDive ID: 136522

Type strain: No

Species: Hugenholtzia roseola

Strain Designation: CR-141

Strain history: CIP <- 2000, J.F. Bernardet, INRA, Jouy en Josas, France <- NCIMB <- R.A. Lewin: strain CR-141

NCBI tax ID(s): 1002 (species)

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General

@ref: 35946

BacDive-ID: 136522

keywords: Bacteria, Gram-negative, rod-shaped

description: Hugenholtzia roseola CR-141 is a Gram-negative, rod-shaped bacterium of the family Bernardetiaceae.

NCBI tax id

  • NCBI tax id: 1002
  • Matching level: species

strain history

  • @ref: 35946
  • history: CIP <- 2000, J.F. Bernardet, INRA, Jouy en Josas, France <- NCIMB <- R.A. Lewin: strain CR-141

doi: 10.13145/bacdive136522.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Cytophagia
  • order: Cytophagales
  • family: Bernardetiaceae
  • genus: Hugenholtzia
  • species: Hugenholtzia roseola
  • full scientific name: Hugenholtzia roseola (Lewin 1969) Hahnke et al. 2017

  • synonyms

    • @ref: 20215
    • synonym: Flexibacter roseolus

@ref: 35946

domain: Bacteria

phylum: Bacteroidetes

class: Cytophagia

order: Cytophagales

family: Bernardetiaceae

genus: Flexibacter

species: Flexibacter roseolus

strain designation: CR-141

type strain: no

Morphology

cell morphology

  • @ref: 35946
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: no

pigmentation

  • @ref: 35946
  • production: no
  • name: Flexirubin

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
35946MEDIUM 33 - For Flexibacter flexilis and Flexibacter elegansyesDistilled water make up to (1000.000 ml);Magnesium sulphate heptahydrate (0.100 g);Calcium chloride dihydrate (0.100 g);Glucose (1.000 g);Potassium nitrate (0.100 g);Casamino acids (1.000 g);Sodium glycerophosphate hexahydrate (0.100 g);Trizma hydrochlori
35946CIP Medium 33yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=33

culture temp

@refgrowthtypetemperature
35946positivegrowth25
35946positivegrowth15-41
35946nogrowth5
35946nogrowth45

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
359464853esculin-hydrolysis
35946606565hippurate-hydrolysis
3594617632nitrate-reduction
3594616301nitrite-reduction
3594615792malonate-assimilation

metabolite production

  • @ref: 35946
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
3594615688acetoin-
3594617234glucose-

enzymes

@refvalueactivityec
35946oxidase-
35946beta-galactosidase-3.2.1.23
35946alcohol dehydrogenase-1.1.1.1
35946gelatinase+
35946amylase-
35946caseinase+3.4.21.50
35946catalase-1.11.1.6
35946tween esterase+
35946gamma-glutamyltransferase-2.3.2.2
35946lecithinase-
35946lipase-
35946lysine decarboxylase-4.1.1.18
35946ornithine decarboxylase-4.1.1.17
35946protease-
35946tryptophan deaminase-
35946urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase+3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin+3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
35946-+++-+++++++--------

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample type
35946Agua CalienteCosta RicaCRIMiddle and South America
35946Agua CalienteCosta RicaCRINorth AmericaEnvironment, Hot spring

Safety information

risk assessment

  • @ref: 35946
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 35946

culture collection no.: CIP 106407, ATCC 23087, LMG 13167, NCIMB 1370

straininfo link

  • @ref: 93661
  • straininfo: 7447

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
35946Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20106407Collection of Institut Pasteur (CIP 106407)
68382Automatically annotated from API zym
93661Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID7447.1