Strain identifier

BacDive ID: 136277

Type strain: No

Species: Pseudomonas oryzihabitans

Strain Designation: Man

Strain history: CIP <- 1994, C. David, Robert Debré Hosp., Reims, France: strain Man

NCBI tax ID(s): 47885 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 8.1 (current version)

General

@ref: 35630

BacDive-ID: 136277

keywords: Bacteria, obligate aerobe, mesophilic, Gram-negative, motile, rod-shaped

description: Pseudomonas oryzihabitans Man is an obligate aerobe, mesophilic, Gram-negative bacterium of the family Pseudomonadaceae.

NCBI tax id

  • NCBI tax id: 47885
  • Matching level: species

strain history

@refhistory
356301994, C. David, R. Debré Hosp., Reims, France: strain Man
35630CIP <- 1994, C. David, Robert Debré Hosp., Reims, France: strain Man

doi: 10.13145/bacdive136277.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Pseudomonadaceae
  • genus: Pseudomonas
  • species: Pseudomonas oryzihabitans
  • full scientific name: Pseudomonas oryzihabitans Kodama et al. 1985

  • synonyms

    @refsynonym
    20215Pseudomonas psychrotolerans
    20215Flavimonas oryzihabitans

@ref: 35630

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Pseudomonas

species: Pseudomonas oryzihabitans

strain designation: Man

type strain: no

Morphology

cell morphology

  • @ref: 35630
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
35630MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
35630CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
35630positivegrowth30mesophilic
35630positivegrowth10-37
35630nogrowth5psychrophilic
35630nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 35630
  • oxygen tolerance: obligate aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3563016947citrate+carbon source
356304853esculin-hydrolysis
3563017632nitrate-reduction
3563016301nitrite-reduction
3563035020tributyrin-hydrolysis
3563017632nitrate-respiration

antibiotic resistance

  • @ref: 35630
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

  • @ref: 35630
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
35630oxidase-
35630beta-galactosidase-3.2.1.23
35630alcohol dehydrogenase-1.1.1.1
35630gelatinase-
35630caseinase-3.4.21.50
35630catalase+1.11.1.6
35630tween esterase-
35630lysine decarboxylase-4.1.1.18
35630ornithine decarboxylase-4.1.1.17
35630urease-3.5.1.5

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
35630+++++----++--------+++----+----+++--+------++--+++++-++++---+-+++------+++-+++-++-+---+-+++++++--++

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typeisolation date
35630ReimsFranceFRAEurope
35630ReimsFranceFRAEuropeHuman, Blood1993

Safety information

risk assessment

  • @ref: 35630
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 35630

culture collection no.: CIP 104150

straininfo link

  • @ref: 93474
  • straininfo: 69815

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
35630Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20104150Collection of Institut Pasteur (CIP 104150)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
93474Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID69815.1