Strain identifier
BacDive ID: 136085
Type strain:
Species: Gardnerella vaginalis
Strain Designation: 366-86
Strain history: CIP <- 1986, Lab. Ident. Inst. Pasteur, Paris, France: strain 366-86 <- A. Béclère Hosp., Clamart, France
NCBI tax ID(s): 2702 (species)
General
@ref: 35386
BacDive-ID: 136085
keywords: Bacteria, facultative anaerobe, mesophilic, Gram-negative, rod-shaped
description: Gardnerella vaginalis 366-86 is a facultative anaerobe, mesophilic, Gram-negative bacterium of the family Bifidobacteriaceae.
NCBI tax id
- NCBI tax id: 2702
- Matching level: species
strain history
- @ref: 35386
- history: CIP <- 1986, Lab. Ident. Inst. Pasteur, Paris, France: strain 366-86 <- A. Béclère Hosp., Clamart, France
doi: 10.13145/bacdive136085.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Bifidobacteriales
- family: Bifidobacteriaceae
- genus: Gardnerella
- species: Gardnerella vaginalis
- full scientific name: Gardnerella vaginalis (Gardner and Dukes 1955) Greenwood and Pickett 1980
synonyms
@ref synonym 20215 Corynebacterium vaginale 20215 Haemophilus vaginalis
@ref: 35386
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Bifidobacteriales
family: Bifidobacteriaceae
genus: Gardnerella
species: Gardnerella vaginalis
strain designation: 366-86
type strain: no
Morphology
cell morphology
- @ref: 35386
- gram stain: negative
- cell shape: rod-shaped
- motility: no
Culture and growth conditions
culture medium
@ref | name | growth | composition | link |
---|---|---|---|---|
35386 | MEDIUM 26 - for Gardnerella and Propionibacterium lymphophilum | yes | Distilled water make up to (1000.000 ml);Horse serum (200.000 ml);Brainheart infusion (37.000 g);Maltose 10 % solution - M0173 (200.000 ml) | |
35386 | CIP Medium 26 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=26 | |
35386 | CIP Medium 252 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=252 |
culture temp
- @ref: 35386
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 35386
- oxygen tolerance: facultative anaerobe
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
35386 | 17632 | nitrate | + | reduction |
35386 | 16301 | nitrite | + | reduction |
metabolite production
- @ref: 35386
- Chebi-ID: 35581
- metabolite: indole
- production: no
enzymes
@ref | value | activity | ec |
---|---|---|---|
35386 | oxidase | - | |
35386 | catalase | - | 1.11.1.6 |
35386 | urease | - | 3.5.1.5 |
68382 | alkaline phosphatase | - | 3.1.3.1 |
68382 | esterase (C 4) | + | |
68382 | esterase lipase (C 8) | - | |
68382 | lipase (C 14) | - | |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | valine arylamidase | - | |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | trypsin | - | 3.4.21.4 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | beta-galactosidase | + | 3.2.1.23 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | alpha-glucosidase | + | 3.2.1.20 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
35386 | - | - | + | - | - | + | - | - | - | - | + | + | - | + | - | + | - | - | - | - |
Isolation, sampling and environmental information
isolation
@ref | geographic location | country | origin.country | continent | sample type | isolation date |
---|---|---|---|---|---|---|
35386 | Clamart | France | FRA | Europe | ||
35386 | Clamart | France | FRA | Europe | Human, Child | 1986 |
Safety information
risk assessment
- @ref: 35386
- biosafety level: 2
- biosafety level comment: Risk group (French classification)
External links
@ref: 35386
culture collection no.: CIP 102382
straininfo link
- @ref: 93327
- straininfo: 68613
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
35386 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20102382 | Collection of Institut Pasteur (CIP 102382) | |
68382 | Automatically annotated from API zym | |||
93327 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID68613.1 |