Strain identifier

BacDive ID: 13602

Type strain: No

Species: Rhizobium leguminosarum

Strain Designation: 3D1k22a

Culture col. no.: DSM 30141, ATCC 14480

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General

@ref: 9165

BacDive-ID: 13602

DSM-Number: 30141

keywords: mesophilic, Bacteria, 16S sequence, genome sequence

description: Rhizobium leguminosarum 3D1k22a is a mesophilic bacterium of the family Rhizobiaceae.

strain history: <- ATCC <- Ura Mae Means (USDA), 3D1k22a

doi: 10.13145/bacdive13602.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/proteobacteria
  • domain: Bacteria
  • phylum: Proteobacteria
  • class: Alphaproteobacteria
  • order: Hyphomicrobiales
  • family: Rhizobiaceae
  • genus: Rhizobium
  • species: Rhizobium leguminosarum
  • full scientific name: Rhizobium leguminosarum (Frank 1879) Frank 1889 (Approved Lists 1980)
  • synonyms

    • @ref: 20215
    • synonym: Rhizobium trifolii

@ref: 9165

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhizobiales

family: Rhizobiaceae

genus: Rhizobium

species: Rhizobium leguminosarum

full scientific name: Rhizobium leguminosarum (Frank 1879) Frank 1889 emend. Ramírez-Bahena et al. 2008

strain designation: 3D1k22a

type strain: no

Culture and growth conditions

culture medium

  • @ref: 9165
  • name: RHIZOBIUM MEDIUM (DSMZ Medium 98)
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium98.pdf

culture temp

  • @ref: 9165
  • growth: positive
  • type: growth
  • temperature: 26
  • range: mesophilic

Physiology and metabolism

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
9165----++-+-+/-+/--++/----+/---+

Safety information

risk assessment

  • @ref: 9165
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Rhizobium leguminosarum strain DSM 30141 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA, partial sequenceAF3452721161ena384
9165Rhizobium leguminosarum strain ATCC 14480 16S ribosomal RNA gene, partial sequenceAY5099001475ena384

Genome sequences

  • @ref: 66792
  • description: Rhizobium trifolii DSM 30141
  • accession: 2861129306
  • assembly level: permanent
  • database: img
  • NCBI tax ID: 384

External links

@ref: 9165

culture collection no.: DSM 30141, ATCC 14480

straininfo link

@refpassport
20218http://www.straininfo.net/strains/164368
20218http://www.straininfo.net/strains/20818

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
9165Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 30141)https://www.dsmz.de/collection/catalogue/details/culture/DSM-30141
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)