Strain identifier
BacDive ID: 135794
Type strain: 
Species: Leuconostoc mesenteroides
Strain history: CIP <- 1978, F. Gasser, Inst. Pasteur, Paris, France <- ATCC <- NRRL: B-512
NCBI tax ID(s): 1245 (species)
version 8.1 (current version)
General
@ref: 35041
BacDive-ID: 135794
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Leuconostoc mesenteroides CIP 78.59 is a mesophilic bacterium of the family Lactobacillaceae.
NCBI tax id
- NCBI tax id: 1245
- Matching level: species
strain history
| @ref | history |
|---|---|
| 67770 | CIP 78.59 <-- F. Gasser <-- ATCC 10830 <-- NRRL B-512. |
| 35041 | CIP <- 1978, F. Gasser, Inst. Pasteur, Paris, France <- ATCC <- NRRL: B-512 |
doi: 10.13145/bacdive135794.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Lactobacillaceae
- genus: Leuconostoc
- species: Leuconostoc mesenteroides
- full scientific name: Leuconostoc mesenteroides (Tsenkovskii 1878) van Tieghem 1878 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Ascococcus mesenteroides
@ref: 35041
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Leuconostocaceae
genus: Leuconostoc
species: Leuconostoc mesenteroides
type strain: no
Morphology
cell morphology
| @ref | motility | confidence | gram stain |
|---|---|---|---|
| 69480 | no | 96.815 | |
| 69480 | 100 | positive |
Culture and growth conditions
culture medium
| @ref | name | growth | composition | link |
|---|---|---|---|---|
| 35041 | MEDIUM 40- for Lactobacillus and Leuconostoc | yes | Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g) | |
| 35041 | CIP Medium 40 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=40 |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 35041 | positive | growth | 25 | mesophilic |
| 67770 | positive | growth | 25 | mesophilic |
Physiology and metabolism
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69481 | no | 100 |
| 69480 | no | 100 |
metabolite production
- @ref: 67770
- Chebi-ID: 52071
- metabolite: dextran
- production: yes
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_41.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_22;96_35;97_36;98_39;99_41&stattab=map
- Last taxonomy: Leuconostoc
- 16S sequence: LC306853
- Sequence Identity:
- Total samples: 44756
- soil counts: 3647
- aquatic counts: 6333
- animal counts: 32069
- plant counts: 2707
Safety information
risk assessment
- @ref: 35041
- biosafety level: 1
- biosafety level comment: Risk group (French classification)
Sequence information
16S sequences
- @ref: 67770
- description: Leuconostoc mesenteroides subsp. mesenteroides gene for 16S ribosomal RNA, partial sequence, strain: JCM 11043
- accession: LC306853
- length: 1489
- database: ena
- NCBI tax ID: 33967
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Leuconostoc mesenteroides strain NCTC10817 | 1245.140 | wgs | patric | 1245 |
| 66792 | Leuconostoc mesenteroides NCTC 10817 | 2873947292 | draft | img | 1245 |
| 67770 | Leuconostoc mesenteroides NCTC10817 | GCA_900452955 | contig | ncbi | 1245 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 100 | no |
| motile | no | 95.694 | no |
| gram-positive | yes | 96.735 | no |
| anaerobic | no | 91.323 | no |
| aerobic | no | 96.636 | no |
| halophile | yes | 93.893 | no |
| spore-forming | no | 94.991 | no |
| glucose-util | yes | 88.788 | no |
| flagellated | no | 96.375 | no |
| thermophile | no | 99.258 | yes |
| glucose-ferment | yes | 91.225 | no |
External links
@ref: 35041
culture collection no.: CIP 78.59, ATCC 10830, NCDO 553, JCM 11043, NCIMB 8590, NBRC 12060, KCTC 3100, IFO 12060, CCM 1854, CCM 1886, CECT 394, DSM 20240, KCTC 3719, LMG 7939, NCDO 796, NCTC 10817, NRRL B-512
straininfo link
- @ref: 93080
- straininfo: 62479
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Metabolism | 454805 | Dextran biosynthesis and dextransucrase production by continuous culture of Leuconostoc mesenteroides. | Lawford GR, Kligerman A, Williams T, Lawford HG | Biotechnol Bioeng | 10.1002/bit.260210704 | 1979 | Dextrans/*biosynthesis, Glucose/metabolism, Glucosyltransferases/*biosynthesis/isolation & purification, Lactobacillaceae/cytology/enzymology/*metabolism, Maltose/metabolism, Sucrose/metabolism | Enzymology |
| Metabolism | 7521648 | A new process for the production of clinical dextran by mixed-culture fermentation of Lipomyces starkeyi and Leuconostoc mesenteroides. | Kim D, Day DF | Enzyme Microb Technol | 10.1016/0141-0229(94)90058-2 | 1994 | Biotechnology/methods, Culture Media, Dextranase/metabolism, Dextrans/*biosynthesis/isolation & purification, Fermentation, Glucosyltransferases/metabolism, Leuconostoc/growth & development/*metabolism, Saccharomycetales/growth & development/*metabolism | Biotechnology |
| Metabolism | 12927026 | Optimization of dextran production by Leuconostoc mesenteroides NRRL B-512 using cheap and local sources of carbohydrate and nitrogen. | Behravan J, Bazzaz BS, Salimi Z | Biotechnol Appl Biochem | 10.1042/BA20030084 | 2003 | Bioreactors/economics/*microbiology, Carbon/metabolism, Cell Culture Techniques/economics/*methods, Culture Media/economics/metabolism, Dextrans/*biosynthesis/economics, Dietary Fiber/economics/*microbiology, Leuconostoc/*growth & development/*metabolism, Molasses/economics/*microbiology, Nitrogen/metabolism, Quality Control, Species Specificity | Phylogeny |
| Metabolism | 15117551 | The depletion of sodium nitrite by lactic acid bacteria isolated from kimchi. | Oh CK, Oh MC, Kim SH | J Med Food | 10.1089/109662004322984680 | 2004 | Brassica/*microbiology, Consumer Product Safety, Fermentation, Food Microbiology, Food Preservatives/adverse effects/*metabolism, Lactobacillus/*metabolism, Leuconostoc/*metabolism, Sodium Nitrite/adverse effects/*metabolism, Temperature, Time Factors | Biotechnology |
| 16347397 | Optimization of Protoplast Formation and Regeneration in Leuconostoc mesenteroides. | Otts DR, Day DF | Appl Environ Microbiol | 10.1128/aem.53.7.1694-1695.1987 | 1987 | |||
| Enzymology | 16632262 | Identification and functional characterization of levS, a gene encoding for a levansucrase from Leuconostoc mesenteroides NRRL B-512 F. | Morales-Arrieta S, Rodriguez ME, Segovia L, Lopez-Munguia A, Olvera-Carranza C | Gene | 10.1016/j.gene.2006.02.007 | 2006 | Bacterial Proteins/biosynthesis/*genetics, Base Sequence, Cloning, Molecular, Escherichia coli, Gene Expression, Hexosyltransferases/biosynthesis/*genetics, Leuconostoc/enzymology/*genetics, Molecular Sequence Data, *Phylogeny, Protein Structure, Tertiary, Recombinant Proteins/biosynthesis/genetics, Sequence Homology, Amino Acid | Genetics |
| Enzymology | 17941439 | Dextran synthesis by immobilized dextran sucrase. | Lopez A, Monsan P | Biochimie | 10.1016/s0300-9084(80)80161-1 | 1980 | Calcium Chloride/pharmacology, Chromatography/methods, Chromatography, Gel, Dextrans/biosynthesis/*chemistry, Enzymes/chemistry, Enzymes, Immobilized/chemistry, Fermentation, Glutaral/chemistry, Kinetics, Leuconostoc/enzymology, Molecular Weight, Silicon Dioxide/chemistry, Sucrase/*chemistry, Sucrose/chemistry | |
| Enzymology | 18600665 | The production of the enzyme dextransucrase using nonaerated fermentation techniques. | Barker PE, Ajongwen NJ | Biotechnol Bioeng | 10.1002/bit.260370803 | 1991 | Biotechnology | |
| Metabolism | 19299163 | Induction of Th1 cytokines by Leuconostoc mesenteroides subsp. mesenteroides (KCTC 3100) under Th2-type conditions and the requirement of NF-kappaB and p38/JNK. | Kang H, Myung EJ, Ahn KS, Eom HJ, Han NS, Kim YB, Kim YJ, Sohn NW | Cytokine | 10.1016/j.cyto.2009.02.005 | 2009 | Allergens/immunology, Animals, Cells, Cultured, Food Microbiology, Immunity, Cellular/immunology, Immunoglobulin E/immunology, Interferon-gamma/*immunology, Interleukin-12/*immunology, Interleukin-4/immunology, JNK Mitogen-Activated Protein Kinases/*metabolism, Leuconostoc/*immunology, Lymphocyte Activation/immunology, Macrophages, Peritoneal/cytology/immunology, Male, Mice, Mice, Inbred BALB C, Mice, Inbred C57BL, NF-kappa B/*metabolism, Ovalbumin/immunology, Signal Transduction/immunology, Spleen/cytology/immunology, Th1 Cells/cytology/*immunology, Th2 Cells/cytology/immunology, p38 Mitogen-Activated Protein Kinases/*metabolism | Biotechnology |
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 35041 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2078.59 | Collection of Institut Pasteur (CIP 78.59) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 93080 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID62479.1 |