Strain identifier

BacDive ID: 135756

Type strain: No

Species: Vibrio cholerae

Strain Designation: 4Z

Strain history: CIP <- 1955, J. Gallut: strain 4Z <- F.M. Burnet

NCBI tax ID(s): 666 (species)

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General

@ref: 34987

BacDive-ID: 135756

keywords: Bacteria, facultative anaerobe, mesophilic, Gram-negative, motile, rod-shaped

description: Vibrio cholerae 4Z is a facultative anaerobe, mesophilic, Gram-negative bacterium that was isolated from Unknown source.

NCBI tax id

  • NCBI tax id: 666
  • Matching level: species

strain history

  • @ref: 34987
  • history: CIP <- 1955, J. Gallut: strain 4Z <- F.M. Burnet

doi: 10.13145/bacdive135756.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Vibrionales
  • family: Vibrionaceae
  • genus: Vibrio
  • species: Vibrio cholerae
  • full scientific name: Vibrio cholerae Pacini 1854 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Vibrio albensis

@ref: 34987

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Vibrionales

family: Vibrionaceae

genus: Vibrio

species: Vibrio cholerae

strain designation: 4Z

type strain: no

Morphology

cell morphology

  • @ref: 34987
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
34987Marine agar (MA)yesDistilled water make up to (1000.000 ml);Marine agar (55.100 g)
34987CIP Medium 13yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=13
34987CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
34987positivegrowth30mesophilic
34987positivegrowth15-41
34987nogrowth5psychrophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 34987
  • oxygen tolerance: facultative anaerobe

halophily

@refsaltgrowthtested relationconcentration
34987NaClpositivegrowth0-6 %
34987NaClnogrowth8 %
34987NaClnogrowth10 %

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371gluconate+builds acid from24265
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose-builds acid from32528
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen+builds acid from28087
68371starch+builds acid from28017
68371raffinose-builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371trehalose+builds acid from27082
68371sucrose+builds acid from17992
68371melibiose-builds acid from28053
68371lactose-builds acid from17716
68371maltose+builds acid from17306
68371cellobiose-builds acid from17057
68371salicin-builds acid from17814
68371esculin-builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine+builds acid from59640
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371D-mannitol+builds acid from16899
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose+builds acid from16024
68371D-fructose+builds acid from15824
68371D-glucose+builds acid from17634
68371D-galactose+builds acid from12936
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose-builds acid from65327
68371D-ribose+builds acid from16988
68371L-arabinose-builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
34987citrate-carbon source16947
34987esculin-hydrolysis4853
34987glucose+fermentation17234
34987lactose-fermentation17716
34987nitrate+reduction17632
34987nitrite-reduction16301
34987sodium thiosulfate-builds gas from132112
34987glucose+degradation17234
34987nitrate-respiration17632

antibiotic resistance

  • @ref: 34987
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: yes
  • is resistant: no

metabolite production

  • @ref: 34987
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
3498715688acetoin+
3498717234glucose+

enzymes

@refvalueactivityec
34987oxidase+
34987beta-galactosidase+3.2.1.23
34987alcohol dehydrogenase-1.1.1.1
34987gelatinase+
34987amylase+
34987DNase+
34987caseinase+3.4.21.50
34987catalase+1.11.1.6
34987tween esterase+
34987gamma-glutamyltransferase+2.3.2.2
34987lecithinase+
34987lipase+
34987lysine decarboxylase+4.1.1.18
34987ornithine decarboxylase+4.1.1.17
34987phenylalanine ammonia-lyase-4.3.1.24
34987protease+
34987tryptophan deaminase-
34987urease-3.5.1.5

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
34987+/----+----++++----+---+-----+--++---++---------+--

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
34987+++++--+-++-+----+-+-----------+++---------------+---------++--------------+--+++-+---+--+++--+---+

Isolation, sampling and environmental information

isolation

  • @ref: 34987
  • sample type: Unknown source

Safety information

risk assessment

  • @ref: 34987
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 34987

culture collection no.: CIP 55.91, ATCC 11623, NCTC 8367

straininfo link

  • @ref: 93045
  • straininfo: 35394

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
34987Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2055.91Collection of Institut Pasteur (CIP 55.91)
68371Automatically annotated from API 50CH acid
93045Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID35394.1