Strain identifier
BacDive ID: 135583
Type strain: 
Species: Shigella flexneri
Strain Designation: 52261
Strain history: CIP <- 1956, Chambon, Inst. Pasteur, Hô Chi Minh-Ville (Saigon), Vietnam, Alkalescens dispar, serotype O3: strain 52261
NCBI tax ID(s): 562 (species)
General
@ref: 34756
BacDive-ID: 135583
keywords: Bacteria, mesophilic, Gram-negative, rod-shaped
description: Shigella flexneri 52261 is a mesophilic, Gram-negative, rod-shaped bacterium that was isolated from Unknown source.
NCBI tax id
- NCBI tax id: 562
- Matching level: species
strain history
| @ref | history |
|---|---|
| 34756 | 1956, Chambon, Inst. Pasteur, Saigon, Vietnam, Alkalescens dispar, serotype O3: strain 52261 |
| 34756 | CIP <- 1956, Chambon, Inst. Pasteur, Hô Chi Minh-Ville (Saigon), Vietnam, Alkalescens dispar, serotype O3: strain 52261 |
doi: 10.13145/bacdive135583.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Enterobacteriaceae
- genus: Shigella
- species: Shigella flexneri
- full scientific name: Shigella flexneri Castellani and Chalmers 1919 (Approved Lists 1980)
@ref: 34756
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacterales
family: Enterobacteriaceae
genus: Shigella
species: Shigella flexneri
strain designation: 52261
type strain: no
Morphology
cell morphology
- @ref: 34756
- gram stain: negative
- cell shape: rod-shaped
- motility: no
Culture and growth conditions
culture medium
| @ref | name | growth | composition | link |
|---|---|---|---|---|
| 34756 | MEDIUM 3 - Columbia agar | yes | Columbia agar (39.000 g);distilled water (1000.000 ml) | |
| 34756 | CIP Medium 3 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3 |
culture temp
- @ref: 34756
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
spore formation
- @ref: 34756
- spore formation: no
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 34756 | 16947 | citrate | - | carbon source |
| 34756 | 17632 | nitrate | + | reduction |
| 34756 | 132112 | sodium thiosulfate | - | builds gas from |
metabolite production
- @ref: 34756
- Chebi-ID: 35581
- metabolite: indole
- production: yes
metabolite tests
| @ref | Chebi-ID | metabolite | voges-proskauer-test | methylred-test |
|---|---|---|---|---|
| 34756 | 15688 | acetoin | - | |
| 34756 | 17234 | glucose | - |
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 34756 | oxidase | - | |
| 34756 | beta-galactosidase | + | 3.2.1.23 |
| 34756 | alcohol dehydrogenase | + | 1.1.1.1 |
| 34756 | lysine decarboxylase | - | 4.1.1.18 |
| 34756 | ornithine decarboxylase | - | 4.1.1.17 |
| 34756 | phenylalanine ammonia-lyase | + | 4.3.1.24 |
| 34756 | urease | - | 3.5.1.5 |
Isolation, sampling and environmental information
isolation
- @ref: 34756
- sample type: Unknown source
- geographic location: Institut Pasteur Hô Chi Minh-Ville (Saigon)
- country: Vietnam
- origin.country: VNM
- continent: Asia
- isolation date: 1956-02-01
Safety information
risk assessment
- @ref: 34756
- biosafety level: 2
- biosafety level comment: Risk group (French classification)
External links
@ref: 34756
culture collection no.: CIP 56.13
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 34756 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2056.13 | Collection of Institut Pasteur (CIP 56.13) |