Strain identifier

BacDive ID: 135478

Type strain: No

Species: Escherichia coli

NCBI tax ID(s): 562 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 34606

BacDive-ID: 135478

keywords: mesophilic, Bacteria, genome sequence

description: Escherichia coli CIP 105184 is a mesophilic bacterium that was isolated from Swine oedema disease.

NCBI tax id

  • NCBI tax id: 562
  • Matching level: species

doi: 10.13145/bacdive135478.20220920.7

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Enterobacteriaceae
  • genus: Escherichia
  • species: Escherichia coli
  • full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)
  • synonyms

    • @ref: 20215
    • synonym: Bacillus coli

@ref: 34606

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacterales

family: Enterobacteriaceae

genus: Escherichia

species: Escherichia coli

type strain: no

Culture and growth conditions

culture medium

  • @ref: 34606
  • name: MEDIUM 3 - Columbia agar
  • growth: yes
  • composition: Columbia agar (39.000 g);distilled water (1000.000 ml)

culture temp

  • @ref: 34606
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 45559
  • sample type: Swine oedema disease
  • country: United Kingdom
  • origin.country: GBR
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Suidae (Pig,Swine)
#Infection#Disease

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Escherichia coli NCTC10674GCA_900450005contigncbi562
66792Escherichia coli strain NCTC10674562.34302wgspatric562

External links

@ref: 34606

culture collection no.: CIP 105184, NCTC 10674, CCUG 11441, CNCTC EcK 198/59

straininfo link

@refpassport
20218http://www.straininfo.net/strains/151032
20218http://www.straininfo.net/strains/134220

Reference

@idauthorstitledoi/urljournalpubmedcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.StrainInfo introduces electronic passports for microorganisms.10.1016/j.syapm.2013.11.002Syst Appl Microbiol. 37: 42-50 201424321274
34606Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/17175 Collection of Institut Pasteur (CIP 105184)
45559Curators of the CCUGhttps://www.ccug.se/strain?id=11441Culture Collection University of Gothenburg (CCUG) (CCUG 11441)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes