Strain identifier
BacDive ID: 13545
Type strain: 
Species: Ensifer meliloti
Strain Designation: 101 (USDA 477), 3DOa5, Fred 101
Strain history: <- ATCC <- L.W. Erdman, 3DOa5 <- L. Leonard <- E. Fred, 101 (USDA 477)
NCBI tax ID(s): 382 (species)
General
@ref: 2445
BacDive-ID: 13545
DSM-Number: 6048
keywords: 16S sequence, Bacteria
description: Ensifer meliloti 101 is a bacterium of the family Rhizobiaceae.
NCBI tax id
- NCBI tax id: 382
- Matching level: species
strain history
- @ref: 2445
- history: <- ATCC <- L.W. Erdman, 3DOa5 <- L. Leonard <- E. Fred, 101 (USDA 477)
doi: 10.13145/bacdive13545.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Hyphomicrobiales
- family: Rhizobiaceae
- genus: Ensifer
- species: Ensifer meliloti
- full scientific name: Ensifer meliloti (Dangeard 1926) Young 2003
synonyms
@ref synonym 20215 Rhizobium meliloti 20215 Sinorhizobium meliloti
@ref: 2445
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhizobiales
family: Rhizobiaceae
genus: Ensifer
species: Ensifer meliloti
full scientific name: Ensifer meliloti (Dangeard 1926) Young 2003
strain designation: 101 (USDA 477), 3DOa5, Fred 101
type strain: no
Culture and growth conditions
culture medium
- @ref: 2445
- name: RHIZOBIUM MEDIUM (DSMZ Medium 98)
- growth: yes
- link: https://mediadive.dsmz.de/medium/98
- composition: Name: RHIZOBIUM MEDIUM (DSMZ Medium 98) Composition: air-dried garden soil 80.0 g/l Agar 15.0 g/l Mannitol 10.0 g/l Yeast extract 1.0 g/l Na2CO3 0.2 g/l Distilled water
culture temp
- @ref: 2445
- growth: positive
- type: growth
- temperature: 26
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_106.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_5;96_84;97_88;98_97;99_106&stattab=map
- Last taxonomy: Sinorhizobium
- 16S sequence: HE963763
- Sequence Identity:
- Total samples: 10577
- soil counts: 5488
- aquatic counts: 1757
- animal counts: 1189
- plant counts: 2143
Safety information
risk assessment
- @ref: 2445
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Sinorhizobium meliloti partial 16S rRNA gene, strain ATCC 10312 | HE963763 | 1449 | nuccore | 382 |
| 20218 | Sinorhizobium meliloti genomic DNA containing 16S rRNA-23S rRNA IGS, strain ATCC 10312, clone ITS1_ATCC 10312 | HE963764 | 1157 | nuccore | 382 |
External links
@ref: 2445
culture collection no.: DSM 6048, ATCC 10312, USDA 477
straininfo link
- @ref: 82734
- straininfo: 35198
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 2445 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 6048) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-6048 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 82734 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID35198.1 | StrainInfo: A central database for resolving microbial strain identifiers |