Strain identifier

BacDive ID: 135423

Type strain: No

Species: Limosilactobacillus pontis

Strain history: CIP <- 1994, P. Stolz, Inst. für Lebensmitteltechnol., Stuttgart, Germany: strain LTH 2585 <- G. Böcker, Hohenheim Univ., Germany

NCBI tax ID(s): 35787 (species)

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General

@ref: 34536

BacDive-ID: 135423

keywords: 16S sequence, Bacteria, facultative anaerobe, Gram-positive, rod-shaped

description: Limosilactobacillus pontis CIP 104230 is a facultative anaerobe, Gram-positive, rod-shaped bacterium of the family Lactobacillaceae.

NCBI tax id

  • NCBI tax id: 35787
  • Matching level: species

strain history

@refhistory
67770CIP 104230 <-- P. Stolz LTH 2585 <-- G. Böcker.
34536CIP <- 1994, P. Stolz, Inst. für Lebensmitteltechnol., Stuttgart, Germany: strain LTH 2585 <- G. Böcker, Hohenheim Univ., Germany

doi: 10.13145/bacdive135423.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Lactobacillaceae
  • genus: Limosilactobacillus
  • species: Limosilactobacillus pontis
  • full scientific name: Limosilactobacillus pontis (Vogel et al. 1994) Zheng et al. 2020

  • synonyms

    • @ref: 20215
    • synonym: Lactobacillus pontis

@ref: 34536

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Lactobacillaceae

genus: Lactobacillus

species: Lactobacillus pontis

type strain: no

Morphology

cell morphology

  • @ref: 34536
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: no

Culture and growth conditions

culture medium

  • @ref: 34536
  • name: MEDIUM 42 - for Lactobacillus pontis
  • growth: yes
  • composition: Distilled water make up to (1000.000 ml);Man Rogosa Sharp broth (55.000 g);Lactobacillus pontis solution - M0209 (18.000 ml)

culture temp

@refgrowthtypetemperature
34536positivegrowth30
67770positivegrowth30
34536positivegrowth15-45

Physiology and metabolism

oxygen tolerance

  • @ref: 34536
  • oxygen tolerance: facultative anaerobe

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371gluconate-builds acid from24265
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose-builds acid from32528
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen-builds acid from28087
68371starch-builds acid from28017
68371raffinose+builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371trehalose-builds acid from27082
68371sucrose-builds acid from17992
68371melibiose+builds acid from28053
68371lactose+builds acid from17716
68371maltose+builds acid from17306
68371cellobiose-builds acid from17057
68371salicin-builds acid from17814
68371esculin-builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine-builds acid from59640
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371D-mannitol-builds acid from16899
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose-builds acid from16024
68371D-fructose+builds acid from15824
68371D-glucose+builds acid from17634
68371D-galactose+builds acid from12936
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose-builds acid from65327
68371D-ribose+builds acid from16988
68371L-arabinose-builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
68371glycerol-builds acid from17754
34536nitrate-reduction17632
34536nitrite-reduction16301

metabolite tests

  • @ref: 34536
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: -

enzymes

@refvalueactivityec
34536oxidase-
34536alcohol dehydrogenase+1.1.1.1
34536catalase-1.11.1.6
34536lysine decarboxylase-4.1.1.18
34536ornithine decarboxylase-4.1.1.17

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
34536----+----+++---------------+++----+--------------

Isolation, sampling and environmental information

isolation

@refcountryorigin.countrycontinentsample typeisolation date
34536GermanyDEUEurope
67770Sourdough
34536GermanyDEUEuropeFood, Wheat sour dough1988

Safety information

risk assessment

  • @ref: 34536
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

Sequence information

16S sequences

  • @ref: 124043
  • description: Lactobacillus pontis gene for 16S rRNA, partial sequence, strain: JCM 11029.
  • accession: AB289265
  • length: 759
  • database: nuccore
  • NCBI tax ID: 35787

GC content

  • @ref: 67770
  • GC-content: 53
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 34536

culture collection no.: CIP 104230, JCM 11029, LTH 2585

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
34536Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20104230Collection of Institut Pasteur (CIP 104230)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68371Automatically annotated from API 50CH acid
124043Dr. Isabel Schober, Dr. Julia KoblitzData extracted from sequence databases, automatically matched based on designation and taxonomy