Strain identifier
BacDive ID: 135331
Type strain: 
Species: Pseudoalteromonas atlantica
Strain Designation: 512-M
Strain history: CIP <- 1993, M. Akagawa-Matsushita, Univ. of Occupational and Environmental Health, Kitakyushu, Japan: strain 512-M
NCBI tax ID(s): 288 (species)
General
@ref: 34420
BacDive-ID: 135331
keywords: Bacteria, Gram-negative, motile, rod-shaped
description: Pseudoalteromonas atlantica 512-M is a Gram-negative, motile, rod-shaped bacterium of the family Pseudoalteromonadaceae.
NCBI tax id
- NCBI tax id: 288
- Matching level: species
strain history
| @ref | history |
|---|---|
| 67770 | M. Akagawa-Matsushita 512-M. |
| 34420 | CIP <- 1993, M. Akagawa-Matsushita, Univ. of Occupational and Environmental Health, Kitakyushu, Japan: strain 512-M |
doi: 10.13145/bacdive135331.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Alteromonadales
- family: Pseudoalteromonadaceae
- genus: Pseudoalteromonas
- species: Pseudoalteromonas atlantica
- full scientific name: Pseudoalteromonas atlantica (Akagawa-Matsushita et al. 1992) Gauthier et al. 1995
synonyms
- @ref: 20215
- synonym: Alteromonas atlantica
@ref: 34420
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Alteromonadales
family: Pseudoalteromonadaceae
genus: Pseudoalteromonas
species: Pseudoalteromonas atlantica
strain designation: 512-M
type strain: no
Morphology
cell morphology
- @ref: 34420
- gram stain: negative
- cell shape: rod-shaped
- motility: yes
Culture and growth conditions
culture medium
| @ref | name | growth | composition | link |
|---|---|---|---|---|
| 34420 | Marine agar (MA) | yes | Distilled water make up to (1000.000 ml);Marine agar (55.100 g) | |
| 34420 | CIP Medium 13 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=13 |
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 34420 | positive | growth | 22 |
| 67770 | positive | growth | 25 |
| 34420 | positive | growth | 5 |
| 34420 | no | growth | 41 |
| 34420 | no | growth | 45 |
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: Q-8
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 34420 | 16947 | citrate | - | carbon source |
| 34420 | 4853 | esculin | + | hydrolysis |
| 34420 | 17632 | nitrate | - | reduction |
| 34420 | 16301 | nitrite | - | reduction |
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 34420 | beta-galactosidase | + | 3.2.1.23 |
| 34420 | alcohol dehydrogenase | - | 1.1.1.1 |
| 34420 | gelatinase | + | |
| 34420 | caseinase | - | 3.4.21.50 |
| 34420 | tween esterase | + | |
| 34420 | lecithinase | - | |
| 34420 | lysine decarboxylase | - | 4.1.1.18 |
| 34420 | ornithine decarboxylase | - | 4.1.1.17 |
Isolation, sampling and environmental information
isolation
| @ref | geographic location | country | origin.country | continent | sample type | isolation date |
|---|---|---|---|---|---|---|
| 34420 | Inubousaki | Japan | JPN | Asia | ||
| 67770 | Chosi City, Chiba Pref. | Japan | JPN | Asia | Seaweed (macroalgae) at Inubousaki | |
| 34420 | Inubousaki | Japan | JPN | Asia | Environment, Seaweed (macroalgae) | 1993 |
Safety information
risk assessment
- @ref: 34420
- biosafety level: 1
- biosafety level comment: Risk group (French classification)
Sequence information
GC content
- @ref: 67770
- GC-content: 40.8
- method: high performance liquid chromatography (HPLC)
External links
@ref: 34420
culture collection no.: CIP 103669, IAM 14161, JCM 8846
straininfo link
- @ref: 92705
- straininfo: 65561
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 34420 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20103669 | Collection of Institut Pasteur (CIP 103669) | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 92705 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID65561.1 |