Strain identifier
BacDive ID: 13533
Type strain: 
Species: Agrobacterium sp.
Strain Designation: LK
Strain history: <- N. Layh; LK
NCBI tax ID(s): 361 (species)
version 9 (current version)
General
@ref: 4350
BacDive-ID: 13533
DSM-Number: 11401
keywords: Bacteria
description: Agrobacterium sp. LK is a bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 361
- Matching level: species
strain history
- @ref: 4350
- history: <- N. Layh; LK
doi: 10.13145/bacdive13533.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Hyphomicrobiales
- family: Rhizobiaceae
- genus: Agrobacterium
- species: Agrobacterium sp.
- full scientific name: Agrobacterium Conn 1942 (Approved Lists 1980)
@ref: 4350
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhizobiales
family: Rhizobiaceae
genus: Agrobacterium
species: Agrobacterium sp.
full scientific name: Agrobacterium sp.
strain designation: LK
type strain: no
Culture and growth conditions
culture medium
- @ref: 4350
- name: CASO AGAR (MERCK 105458) (DSMZ Medium 220)
- growth: yes
- link: https://mediadive.dsmz.de/medium/220
- composition: Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
culture temp
- @ref: 4350
- growth: positive
- type: growth
- temperature: 28
Physiology and metabolism
compound production
| @ref | compound |
|---|---|
| 4350 | nitrile hydratase |
| 4350 | arylamide amidase |
Isolation, sampling and environmental information
isolation
- @ref: 4350
- sample type: soil
- geographic location: Stuttgart
- country: Germany
- origin.country: DEU
- continent: Europe
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
External links
@ref: 4350
culture collection no.: DSM 11401
straininfo link
- @ref: 82724
- straininfo: 49104
literature
- topic: Enzymology
- Pubmed-ID: 15162394
- title: Searching for nitrile hydratase using the Consensus-Degenerate Hybrid Oligonucleotide Primers strategy.
- authors: Lourenco PM, Almeida T, Mendonca D, Simoes F, Novo C
- journal: J Basic Microbiol
- DOI: 10.1002/jobm.200310340
- year: 2004
- mesh: Agrobacterium tumefaciens/enzymology/genetics, Comamonadaceae/enzymology/genetics, Consensus Sequence, *DNA Primers, DNA, Bacterial/chemistry/isolation & purification, Genes, Bacterial, Hydro-Lyases/*genetics/*isolation & purification, Molecular Sequence Data, Phylogeny, *Polymerase Chain Reaction, Protein Subunits, Rhodococcus/enzymology/genetics/growth & development, Sequence Alignment, Sequence Analysis, DNA, Sequence Homology
- topic2: Phylogeny
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 4350 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 11401) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-11401 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 82724 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID49104.1 | StrainInfo: A central database for resolving microbial strain identifiers |