Strain identifier

BacDive ID: 135258

Type strain: No

Species: Paenibacillus validus

Strain history: CIP <- 1991, F. Pichinoty, CNRS, Marseille, France: strain Pohb 3, Bacillus gordonae

NCBI tax ID(s): 44253 (species)

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General

@ref: 34300

BacDive-ID: 135258

keywords: Bacteria, obligate aerobe, spore-forming, mesophilic, Gram-positive, motile, rod-shaped

description: Paenibacillus validus CIP 103496 is an obligate aerobe, spore-forming, mesophilic bacterium of the family Paenibacillaceae.

NCBI tax id

  • NCBI tax id: 44253
  • Matching level: species

strain history

@refhistory
343001991, F. Pichinoty, CNRS, Marseille, France: strain Pohb 3, Bacillus gordonae
34300CIP <- 1991, F. Pichinoty, CNRS, Marseille, France: strain Pohb 3, Bacillus gordonae

doi: 10.13145/bacdive135258.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Paenibacillaceae
  • genus: Paenibacillus
  • species: Paenibacillus validus
  • full scientific name: Paenibacillus validus (Nakamura 1984 ex Bredemann and Heigener 1935) Ash et al. 1994

  • synonyms

    @refsynonym
    20215Paenibacillus gordonae
    20215Bacillus gordonae
    20215Bacillus validus

@ref: 34300

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Paenibacillaceae

genus: Paenibacillus

species: Paenibacillus validus

type strain: no

Morphology

cell morphology

  • @ref: 34300
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
34300MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
34300CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
34300positivegrowth30mesophilic
34300positivegrowth30-45

Physiology and metabolism

oxygen tolerance

  • @ref: 34300
  • oxygen tolerance: obligate aerobe

spore formation

  • @ref: 34300
  • spore formation: yes

halophily

@refsaltgrowthtested relationconcentration
34300NaClpositivegrowth0-2 %
34300NaClnogrowth4 %
34300NaClnogrowth6 %

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371gluconate-builds acid from24265
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-lyxose-builds acid from62318
68371turanose+builds acid from32528
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen+builds acid from28087
68371starch-builds acid from28017
68371raffinose-builds acid from16634
68371melezitose-builds acid from6731
68371trehalose-builds acid from27082
68371sucrose+builds acid from17992
68371melibiose-builds acid from28053
68371lactose-builds acid from17716
68371maltose+builds acid from17306
68371cellobiose+builds acid from17057
68371esculin+builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine-builds acid from59640
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371D-mannitol+builds acid from16899
68371myo-inositol+builds acid from17268
68371galactitol+builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose+builds acid from16024
68371D-fructose+builds acid from15824
68371D-glucose+builds acid from17634
68371D-galactose+builds acid from12936
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose+builds acid from65327
68371D-ribose+builds acid from16988
68371L-arabinose-builds acid from30849
68371erythritol-builds acid from17113
68371glycerol+builds acid from17754
34300nitrate+reduction17632
34300nitrite-reduction16301
34300nitrate-respiration17632

metabolite production

  • @ref: 34300
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 34300
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: +

enzymes

@refvalueactivityec
34300oxidase-
34300alcohol dehydrogenase-1.1.1.1
34300amylase+
34300caseinase-3.4.21.50
34300catalase+1.11.1.6
34300lecithinase-
34300lysine decarboxylase-4.1.1.18
34300ornithine decarboxylase-4.1.1.17
34300urease-3.5.1.5

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
34300+-+/--++---++++--+++--+/----++/-++--+-+/----+--+-+/--------

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample type
34300MarseilleFranceFRAEurope
34300MarseilleFranceFRAEuropeEnvironment, Soil enriched with p-hydroxybenzoate

Safety information

risk assessment

  • @ref: 34300
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 34300

culture collection no.: CIP 103496

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
34300Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20103496Collection of Institut Pasteur (CIP 103496)
68371Automatically annotated from API 50CH acid