Strain identifier

BacDive ID: 135021

Type strain: No

Species: Mycobacterium bohemicum

Strain Designation: 2

Strain history: CIP <- 2001, M. Drancourt, Timone Hosp., Marseille, France: strain 2

NCBI tax ID(s): 56425 (species)

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General

@ref: 33743

BacDive-ID: 135021

keywords: Bacteria, obligate aerobe, mesophilic, rod-shaped

description: Mycobacterium bohemicum 2 is an obligate aerobe, mesophilic, rod-shaped bacterium that was isolated from Human, Bronchopulmonary swab.

NCBI tax id

  • NCBI tax id: 56425
  • Matching level: species

strain history

@refhistory
337432001, M. Drancourt, Timone Hosp., Marseille, France: strain 2
33743CIP <- 2001, M. Drancourt, Timone Hosp., Marseille, France: strain 2

doi: 10.13145/bacdive135021.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Mycobacteriaceae
  • genus: Mycobacterium
  • species: Mycobacterium bohemicum
  • full scientific name: Mycobacterium bohemicum Reischl et al. 1998

@ref: 33743

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Mycobacteriaceae

genus: Mycobacterium

species: Mycobacterium bohemicum

strain designation: 2

type strain: no

Morphology

cell morphology

  • @ref: 33743
  • cell shape: rod-shaped
  • motility: no

Culture and growth conditions

culture medium

@refnamegrowthlink
33743MEDIUM 55 - for Mycobacteriumyes
33743CIP Medium 55yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=55

culture temp

  • @ref: 33743
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 33743
  • oxygen tolerance: obligate aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
33743606565hippurate-hydrolysis
3374317632nitrate+reduction
3374316301nitrite-reduction
3374317632nitrate-respiration

metabolite production

  • @ref: 33743
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
33743oxidase-
33743beta-galactosidase+3.2.1.23
33743catalase-1.11.1.6
33743gamma-glutamyltransferase-2.3.2.2
33743urease-3.5.1.5
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
33743--++-+----++--------

Isolation, sampling and environmental information

isolation

  • @ref: 33743
  • sample type: Human, Bronchopulmonary swab

Safety information

risk assessment

  • @ref: 33743
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 33743

culture collection no.: CIP 107298

straininfo link

  • @ref: 92448
  • straininfo: 362118

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
33743Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20107298Collection of Institut Pasteur (CIP 107298)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
68382Automatically annotated from API zym
92448Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID362118.1