Strain identifier

BacDive ID: 134942

Type strain: No

Species: Pasteurella dagmatis

Strain Designation: 16-87

Strain history: CIP <- 1987, Lab. Ident. Inst. Pasteur, Paris, France: strain 16-87

NCBI tax ID(s): 754 (species)

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General

@ref: 33619

BacDive-ID: 134942

keywords: Bacteria, mesophilic, Gram-negative, rod-shaped

description: Pasteurella dagmatis 16-87 is a mesophilic, Gram-negative, rod-shaped bacterium of the family Pasteurellaceae.

NCBI tax id

  • NCBI tax id: 754
  • Matching level: species

strain history

  • @ref: 33619
  • history: CIP <- 1987, Lab. Ident. Inst. Pasteur, Paris, France: strain 16-87

doi: 10.13145/bacdive134942.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Pasteurella
  • species: Pasteurella dagmatis
  • full scientific name: Pasteurella dagmatis Mutters et al. 1985

@ref: 33619

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Pasteurella

species: Pasteurella dagmatis

strain designation: 16-87

type strain: no

Morphology

cell morphology

  • @ref: 33619
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: no

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
33619MEDIUM 118 - for Pasteurella, Actinobacillus and Psychrobacter frigidicolayesDistilled water make up to (1000.000 ml);Yeast extract (1.000 g);Tryptocasein soy agar (40.000 g)
33619CIP Medium 118-byeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=118-b

culture temp

@refgrowthtypetemperaturerange
33619positivegrowth37mesophilic
33619positivegrowth15-37
33619nogrowth45thermophilic

Physiology and metabolism

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose-builds acid from32528
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen-builds acid from28087
68371starch+builds acid from28017
68371raffinose-builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371melibiose-builds acid from28053
68371lactose-builds acid from17716
68371cellobiose-builds acid from17057
68371salicin-builds acid from17814
68371esculin-builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371D-mannitol-builds acid from16899
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose-builds acid from65327
68371L-arabinose-builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
68371glycerol-builds acid from17754
33619citrate-carbon source16947
33619lactose+fermentation17716
33619nitrate+reduction17632
33619nitrite-reduction16301
33619sodium thiosulfate-builds gas from132112

antibiotic resistance

  • @ref: 33619
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: yes
  • is resistant: no

metabolite production

  • @ref: 33619
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

  • @ref: 33619
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: +

enzymes

@refvalueactivityec
33619oxidase+
33619beta-galactosidase-3.2.1.23
33619alcohol dehydrogenase-1.1.1.1
33619catalase+1.11.1.6
33619lysine decarboxylase-4.1.1.18
33619ornithine decarboxylase-4.1.1.17
33619urease+3.5.1.5

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
33619----+/-----+/-+/-+/-+/---------+/------+/---+/-+/----+----------+/---

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample typeisolation date
33619RoanneFranceFRAEurope
33619RoanneFranceFRAEuropeHuman, Dog bite1987

Safety information

risk assessment

  • @ref: 33619
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

External links

@ref: 33619

culture collection no.: CIP 102773, ATCC 51570

straininfo link

  • @ref: 92376
  • straininfo: 43053

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
33619Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20102773Collection of Institut Pasteur (CIP 102773)
68371Automatically annotated from API 50CH acid
92376Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID43053.1