Strain identifier

BacDive ID: 134830

Type strain: No

Species: Shewanella putrefaciens

Strain Designation: II 1 Ax

Strain history: CIP <- 1972, H. Leclerc, Inst. Pasteur, Lille, France: strain II 1 Ax

NCBI tax ID(s): 24 (species)

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General

@ref: 33483

BacDive-ID: 134830

keywords: Bacteria, obligate aerobe, mesophilic, Gram-negative, motile, rod-shaped

description: Shewanella putrefaciens II 1 Ax is an obligate aerobe, mesophilic, Gram-negative bacterium of the family Shewanellaceae.

NCBI tax id

  • NCBI tax id: 24
  • Matching level: species

strain history

@refhistory
334831972, H. Leclerc, Inst. Pasteur, Lille, France: strain II 1 Ax
33483CIP <- 1972, H. Leclerc, Inst. Pasteur, Lille, France: strain II 1 Ax

doi: 10.13145/bacdive134830.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Alteromonadales
  • family: Shewanellaceae
  • genus: Shewanella
  • species: Shewanella putrefaciens
  • full scientific name: Shewanella putrefaciens (Lee et al. 1981 ex Derby and Hammer 1931) MacDonell and Colwell 1986

  • synonyms

    • @ref: 20215
    • synonym: Alteromonas putrefaciens

@ref: 33483

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Alteromonadales

family: Shewanellaceae

genus: Shewanella

species: Shewanella putrefaciens

strain designation: II 1 Ax

type strain: no

Morphology

cell morphology

  • @ref: 33483
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: yes

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
33483MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
33483CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
33483positivegrowth25mesophilic
33483positivegrowth5-30
33483nogrowth37mesophilic
33483nogrowth41thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 33483
  • oxygen tolerance: obligate aerobe

halophily

@refsaltgrowthtested relationconcentration
33483NaClpositivegrowth0-6 %
33483NaClnogrowth8 %
33483NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3348316947citrate-carbon source
334834853esculin+hydrolysis
3348317632nitrate+reduction
3348316301nitrite+reduction
33483132112sodium thiosulfate+builds gas from
3348317632nitrate+respiration

antibiotic resistance

  • @ref: 33483
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

  • @ref: 33483
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
33483oxidase+
33483beta-galactosidase-3.2.1.23
33483alcohol dehydrogenase-1.1.1.1
33483gelatinase+
33483amylase-
33483DNase-
33483caseinase+3.4.21.50
33483catalase+1.11.1.6
33483tween esterase+
33483lecithinase-
33483lipase-
33483lysine decarboxylase-4.1.1.18
33483ornithine decarboxylase+4.1.1.17
33483protease+
33483tryptophan deaminase-
33483urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase+3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin+3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
33483-+++-+-+++++---+-+--

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
33483+------+-++------------------------------------+++---------++-----------+--+--+++-+---+--++---+-+++

Safety information

risk assessment

  • @ref: 33483
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

External links

@ref: 33483

culture collection no.: CIP 72.4

straininfo link

  • @ref: 92281
  • straininfo: 70085

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
33483Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2072.4Collection of Institut Pasteur (CIP 72.4)
68382Automatically annotated from API zym
92281Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID70085.1