Strain identifier
BacDive ID: 134404
Type strain: 
Species: Streptococcus pyogenes
Strain Designation: T2 44/RB/4
Strain history: CIP <- 1956, R. Wahl: strain A5 t2, Streptococcus pyogenes <- Williams, Public Hlth. Lab., Colindale, London, UK <- R. Lancefield: strain T2 44/RB/4
NCBI tax ID(s): 1314 (species)
version 9.3 (current version)
General
@ref: 32702
BacDive-ID: 134404
keywords: genome sequence, Bacteria, mesophilic
description: Streptococcus pyogenes T2 44/RB/4 is a mesophilic bacterium of the family Streptococcaceae.
NCBI tax id
- NCBI tax id: 1314
- Matching level: species
strain history
- @ref: 32702
- history: CIP <- 1956, R. Wahl: strain A5 t2, Streptococcus pyogenes <- Williams, Public Hlth. Lab., Colindale, London, UK <- R. Lancefield: strain T2 44/RB/4
doi: 10.13145/bacdive134404.20250331.9.3
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Streptococcaceae
- genus: Streptococcus
- species: Streptococcus pyogenes
- full scientific name: Streptococcus pyogenes Rosenbach 1884 (Approved Lists 1980)
@ref: 32702
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Streptococcaceae
genus: Streptococcus
species: Streptococcus pyogenes
strain designation: T2 44/RB/4
type strain: no
Morphology
cell morphology
- @ref: 125438
- motility: no
- confidence: 93
Culture and growth conditions
culture medium
| @ref | name | growth | composition | link |
|---|---|---|---|---|
| 32702 | MEDIUM 29- Brain heart agar | yes | Distilled water make up to (1000.000 ml);Brain heart infusion agar (52.000 g) | |
| 32702 | CIP Medium 29 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=29 |
culture temp
- @ref: 32702
- growth: positive
- type: growth
- temperature: 37
Physiology and metabolism
oxygen tolerance
- @ref: 125439
- oxygen tolerance: microaerophile
- confidence: 97.5
Safety information
risk assessment
- @ref: 32702
- biosafety level: 2
- biosafety level comment: Risk group (French classification)
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Streptococcus pyogenes NCTC8322 | GCA_900475335 | complete | ncbi | 1314 |
| 66792 | Streptococcus pyogenes strain NCTC8322 | 1314.748 | complete | patric | 1314 |
Genome-based predictions
predictions
| @ref | model | trait | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 84.796 | no |
| 125438 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 94.051 | no |
| 125438 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 96.772 | no |
| 125438 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 87.967 | no |
| 125438 | thermophile | thermophilic | Ability to grow at temperatures above or equal to 45°C | no | 97.913 | no |
| 125438 | motile2+ | flagellated | Ability to perform flagellated movement | no | 93 | no |
| 125439 | BacteriaNet | spore_formation | Ability to form endo- or exospores | no | 86.7 | |
| 125439 | BacteriaNet | motility | Ability to perform movement | no | 69 | |
| 125439 | BacteriaNet | gram_stain | Reaction to gram-staining | positive | 85.5 | |
| 125439 | BacteriaNet | oxygen_tolerance | Oxygenic conditions needed for growth | microaerophile | 97.5 |
External links
@ref: 32702
culture collection no.: CIP 56.42, IMET 3005, NCTC 8322, CCUG 11874
straininfo link
- @ref: 91933
- straininfo: 70455
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 32702 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2056.42 | Collection of Institut Pasteur (CIP 56.42) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 91933 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID70455.1 | |
| 125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann | Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets | 10.1101/2024.08.12.607695 | |
| 125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy | deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 | https://github.com/GenomeNet/deepG |