Strain identifier

BacDive ID: 134264

Type strain: Yes

Species: Enterococcus camelliae

Strain Designation: FP15-1

Strain history: CIP <- 2007, NBRC <- S. Tanasupawat, Chulalongkorn Univ., Bangkok, Thailand: strain FP15-1

NCBI tax ID(s): 453959 (species)

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General

@ref: 32199

BacDive-ID: 134264

keywords: 16S sequence, Bacteria, facultative anaerobe, Gram-positive, coccus-shaped

description: Enterococcus camelliae FP15-1 is a facultative anaerobe, Gram-positive, coccus-shaped bacterium that was isolated from From fermented tea leaves.

NCBI tax id

  • NCBI tax id: 453959
  • Matching level: species

strain history

@refhistory
67771<- S Tanasupawat, Chulalonkorn Univ., Thailand
117110CIP <- 2007, NBRC <- S. Tanasupawat, Chulalongkorn Univ., Bangkok, Thailand: strain FP15-1

doi: 10.13145/bacdive134264.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Enterococcaceae
  • genus: Enterococcus
  • species: Enterococcus camelliae
  • full scientific name: Enterococcus camelliae Sukontasing et al. 2007

@ref: 32199

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Enterococcaceae

genus: Enterococcus

species: Enterococcus camelliae

strain designation: FP15-1

type strain: yes

Morphology

cell morphology

@refgram staincell lengthcell widthcell shapemotility
32199positive0.5-1 µm0.5-1 µmcoccus-shapedno
67771ovoid-shapedno
67771sphere-shaped
67771positive
117110positivecoccus-shapedno

pigmentation

  • @ref: 32199
  • production: no

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
37817MEDIUM 40- for Lactobacillus and LeuconostocyesDistilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g)
117110CIP Medium 40yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=40

culture temp

@refgrowthtypetemperature
32199positivegrowth15-45
32199positiveoptimum30
37817positivegrowth30
67771positivegrowth30

culture pH

@refabilitytypepHPH range
32199positivegrowth5.0-9.6alkaliphile
32199positiveoptimum7.3

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
32199facultative anaerobe
67771facultative anaerobe
117110facultative anaerobe

spore formation

@refspore formation
32199no
67771no

halophily

@refsaltgrowthtested relationconcentration
32199NaClpositivegrowth2-6 %
32199NaClpositiveoptimum4 %

observation

@refobservation
32199aggregates in chains
67771quinones: DMK-7

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3219917057cellobiose+carbon source
3219928757fructose+carbon source
3219917234glucose+carbon source
3219917306maltose+carbon source
3219929864mannitol+carbon source
3219937684mannose+carbon source
3219917814salicin+carbon source
3219917992sucrose+carbon source
3219927082trehalose+carbon source
321994853esculin+hydrolysis
68371Potassium 2-ketogluconate-builds acid from
6837124265gluconate-builds acid from
6837118403L-arabitol-builds acid from
6837118287L-fucose-builds acid from
6837128847D-fucose-builds acid from
6837116443D-tagatose-builds acid from
6837162318D-lyxose-builds acid from
6837132528turanose-builds acid from
6837128066gentiobiose+builds acid from
6837117151xylitol-builds acid from
6837128087glycogen-builds acid from
6837128017starch+builds acid from
6837116634raffinose-builds acid from
683716731melezitose-builds acid from
6837115443inulin-builds acid from
6837127082trehalose+builds acid from
6837117992sucrose+builds acid from
6837128053melibiose-builds acid from
6837117716lactose-builds acid from
6837117306maltose+builds acid from
6837117057cellobiose+builds acid from
6837117814salicin+builds acid from
683714853esculin+builds acid from
6837118305arbutin+builds acid from
6837127613amygdalin+builds acid from
6837159640N-acetylglucosamine+builds acid from
68371320061methyl alpha-D-glucopyranoside-builds acid from
6837143943methyl alpha-D-mannoside-builds acid from
6837117924D-sorbitol-builds acid from
6837116899D-mannitol+builds acid from
6837117268myo-inositol-builds acid from
6837116813galactitol-builds acid from
6837162345L-rhamnose-builds acid from
6837117266L-sorbose-builds acid from
6837116024D-mannose+builds acid from
6837115824D-fructose+builds acid from
6837117634D-glucose+builds acid from
6837112936D-galactose-builds acid from
6837174863methyl beta-D-xylopyranoside-builds acid from
6837115963ribitol-builds acid from
6837165328L-xylose-builds acid from
6837165327D-xylose-builds acid from
6837116988D-ribose-builds acid from
6837130849L-arabinose-builds acid from
6837117108D-arabinose-builds acid from
6837117113erythritol-builds acid from
6837117754glycerol-builds acid from
11711017632nitrate-reduction
11711016301nitrite-reduction

metabolite production

  • @ref: 117110
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
117110oxidase-
117110catalase-1.11.1.6
117110urease-3.5.1.5
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase-3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase-
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
117110--+-------+----+----

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
117110----------+++----+---+++++++--++---+--+-----+/----+/-

Isolation, sampling and environmental information

isolation

@refsample typecountryorigin.countrycontinentgeographic locationisolation date
67771From fermented tea leaves(miang)ThailandTHAAsia
117110Plant, Miang, fermented tea leavesThailandTHAAsiaChiangmai province1983

taxonmaps

  • @ref: 69479
  • File name: preview.99_4369.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_13;96_1097;97_1285;98_3282;99_4369&stattab=map
  • Last taxonomy: Enterococcus
  • 16S sequence: EF154454
  • Sequence Identity:
  • Total samples: 16591
  • soil counts: 493
  • aquatic counts: 2257
  • animal counts: 12994
  • plant counts: 847

Safety information

risk assessment

  • @ref: 117110
  • biosafety level: 2
  • biosafety level comment: Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
32199Enterococcus camelliae strain FP15-1 16S ribosomal RNA gene, partial sequenceEF1544541490nuccore453959
124043Enterococcus camelliae gene for 16S rRNA, partial sequence, strain: NBRC 101868.AB6815731482nuccore453959

GC content

  • @ref: 32199
  • GC-content: 37.8

External links

@ref: 32199

culture collection no.: KCTC 13133, NBRC 101868, NRIC 0105, TISTR 932, PCU 277, CIP 109706

straininfo link

  • @ref: 91851
  • straininfo: 309531

literature

  • topic: Phylogeny
  • Pubmed-ID: 17766890
  • title: Enterococcus camelliae sp. nov., isolated from fermented tea leaves in Thailand.
  • authors: Sukontasing S, Tanasupawat S, Moonmangmee S, Lee JS, Suzuki KI
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.65109-0
  • year: 2007
  • mesh: Aerobiosis, Anaerobiosis, Bacterial Typing Techniques, Base Composition, Carbohydrate Metabolism, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Enterococcus/*classification/genetics/*isolation & purification/metabolism, Fatty Acids/analysis, *Food Microbiology, Genes, rRNA, Glucose/metabolism, Lactic Acid/metabolism, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, Plant Leaves/microbiology, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sequence Homology, Nucleic Acid, Tea/microbiology, Thailand, Vitamin K 2/analysis
  • topic2: Metabolism

Reference

@idauthorstitledoi/urlID_cross_referencepubmedcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
32199Barberan A, Caceres Velazquez H, Jones S, Fierer N.Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information10.1128/mSphere.00237-172844128776041
37817Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/7479
67771Curators of the KCTChttps://kctc.kribb.re.kr/En/Kctc
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
91851Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID309531.1
117110Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20109706Collection of Institut Pasteur (CIP 109706)
124043Dr. Isabel Schober, Dr. Julia KoblitzData extracted from sequence databases, automatically matched based on designation and taxonomy