Strain identifier
BacDive ID: 134095
Type strain: 
Species: Tenuibacillus multivorans
Strain Designation: 28-1
NCBI tax ID(s): 237069 (species)
version 8.1 (current version)
General
@ref: 31272
BacDive-ID: 134095
keywords: genome sequence, 16S sequence, Bacteria, aerobe, spore-forming, Gram-positive, motile, rod-shaped
description: Tenuibacillus multivorans 28-1 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from hypersaline environment.
NCBI tax id
- NCBI tax id: 237069
- Matching level: species
doi: 10.13145/bacdive134095.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Tenuibacillus
- species: Tenuibacillus multivorans
- full scientific name: Tenuibacillus multivorans Ren and Zhou 2005
@ref: 31272
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Caryophanales
family: Bacillaceae
genus: Tenuibacillus
species: Tenuibacillus multivorans
strain designation: 28-1
type strain: yes
Morphology
cell morphology
- @ref: 31272
- gram stain: positive
- cell length: 4 µm
- cell width: 0.4 µm
- cell shape: rod-shaped
- motility: yes
Culture and growth conditions
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 31272 | positive | growth | 21-42 | |
| 31272 | positive | optimum | 38.5 | mesophilic |
culture pH
| @ref | ability | type | pH | PH range |
|---|---|---|---|---|
| 31272 | positive | growth | 6.5-9 | alkaliphile |
| 31272 | positive | optimum | 7.5 |
Physiology and metabolism
oxygen tolerance
- @ref: 31272
- oxygen tolerance: aerobe
spore formation
- @ref: 31272
- spore formation: yes
halophily
| @ref | salt | growth | tested relation | concentration |
|---|---|---|---|---|
| 31272 | NaCl | positive | growth | 01-20 % |
| 31272 | NaCl | positive | optimum | 5 % |
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 31272 | 22599 | arabinose | + | carbon source |
| 31272 | 17057 | cellobiose | + | carbon source |
| 31272 | 28757 | fructose | + | carbon source |
| 31272 | 28260 | galactose | + | carbon source |
| 31272 | 17234 | glucose | + | carbon source |
| 31272 | 17754 | glycerol | + | carbon source |
| 31272 | 17716 | lactose | + | carbon source |
| 31272 | 17306 | maltose | + | carbon source |
| 31272 | 29864 | mannitol | + | carbon source |
| 31272 | 37684 | mannose | + | carbon source |
| 31272 | 28053 | melibiose | + | carbon source |
| 31272 | 16634 | raffinose | + | carbon source |
| 31272 | 26546 | rhamnose | + | carbon source |
| 31272 | 17992 | sucrose | + | carbon source |
| 31272 | 27082 | trehalose | + | carbon source |
| 31272 | 18222 | xylose | + | carbon source |
| 31272 | 4853 | esculin | + | hydrolysis |
metabolite production
- @ref: 31272
- Chebi-ID: 16136
- metabolite: hydrogen sulfide
- production: yes
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 31272 | catalase | + | 1.11.1.6 |
| 31272 | cytochrome oxidase | + | 1.9.3.1 |
Isolation, sampling and environmental information
isolation
- @ref: 31272
- sample type: hypersaline environment
isolation source categories
- Cat1: #Condition
- Cat2: #Saline
taxonmaps
- @ref: 69479
- File name: preview.99_18400.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_8920;97_11299;98_13896;99_18400&stattab=map
- Last taxonomy: Tenuibacillus multivorans subclade
- 16S sequence: AY319933
- Sequence Identity:
- Total samples: 21
- soil counts: 7
- aquatic counts: 6
- animal counts: 6
- plant counts: 2
Sequence information
16S sequences
- @ref: 31272
- description: Tenuibacillus multivorans strain 28-1 16S ribosomal RNA gene, partial sequence
- accession: AY319933
- length: 1479
- database: nuccore
- NCBI tax ID: 237069
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Tenuibacillus multivorans NBRC 100370 | GCA_007989445 | contig | ncbi | 237069 |
| 66792 | Tenuibacillus multivorans strain NBRC 100370 | 237069.5 | wgs | patric | 237069 |
GC content
- @ref: 31272
- GC-content: 36.75
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | yes | 90.358 | yes |
| gram-positive | yes | 86.086 | no |
| anaerobic | no | 99.134 | yes |
| aerobic | yes | 95.261 | yes |
| halophile | yes | 87.937 | no |
| spore-forming | yes | 93.907 | yes |
| glucose-util | yes | 85.853 | yes |
| flagellated | yes | 70.134 | no |
| thermophile | no | 91.8 | yes |
| glucose-ferment | no | 90.948 | no |
External links
@ref: 31272
culture collection no.: AS 1.3442, NBRC 100370
straininfo link
- @ref: 91703
- straininfo: 135138
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 15653860 | Tenuibacillus multivorans gen. nov., sp. nov., a moderately halophilic bacterium isolated from saline soil in Xin-Jiang, China. | Ren PG, Zhou PJ | Int J Syst Evol Microbiol | 10.1099/ijs.0.63180-0 | 2005 | Bacillaceae/chemistry/*classification/genetics/*isolation & purification, Bacterial Typing Techniques, China, DNA, Ribosomal, Fresh Water/*microbiology, Genes, rRNA, Geologic Sediments/*microbiology, Molecular Sequence Data, Phenotype, Phylogeny, RNA, Ribosomal, 16S, *Sodium Chloride | Genetics |
| Phylogeny | 22941247 | Tenuibacillus halotolerans sp. nov., a novel bacterium isolated from a soil sample from a salt lake in Xinjiang, China and emended description of the genus Tenuibacillus. | Gao XH, Gao S, Zhou Y, Guan HL, Zhang YJ, Jia M, Huang HW, Yang DX, Li WJ, Tang SK | Antonie Van Leeuwenhoek | 10.1007/s10482-012-9802-3 | 2012 | Bacillaceae/*classification/genetics/*isolation & purification/physiology, Bacterial Typing Techniques, Base Composition, China, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Diaminopimelic Acid/analysis, Fatty Acids/analysis, Hydrogen-Ion Concentration, Microscopy, Electron, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/analysis, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sodium Chloride/metabolism, *Soil Microbiology, Temperature, Vitamin K 2/analysis | Genetics |
Reference
| @id | authors | title | doi/url | ID_cross_reference | pubmed | journal |
|---|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
| 31272 | Barberan A, Caceres Velazquez H, Jones S, Fierer N. | Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information | 10.1128/mSphere.00237-17 | 27592 | 28776041 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |||
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | 10.1093/nar/gkaa1025 | 33211880 | Nucleic Acids Res. 49: D498-D508 2020 | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |||
| 91703 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID135138.1 |