Strain identifier
BacDive ID: 133946
Type strain: 
Species: Methylobacterium trifolii
Strain Designation: TA73
NCBI tax ID(s): 1003092 (species)
version 8.1 (current version)
General
@ref: 30928
BacDive-ID: 133946
keywords: Bacteria, aerobe, Gram-negative, rod-shaped
description: Methylobacterium trifolii TA73 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from plant associated.
NCBI tax id
- NCBI tax id: 1003092
- Matching level: species
doi: 10.13145/bacdive133946.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Hyphomicrobiales
- family: Methylobacteriaceae
- genus: Methylobacterium
- species: Methylobacterium trifolii
- full scientific name: Methylobacterium trifolii Wellner et al. 2013
@ref: 30928
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Hyphomicrobiales
family: Methylobacteriaceae
genus: Methylobacterium
species: Methylobacterium trifolii
strain designation: TA73
type strain: yes
Morphology
cell morphology
- @ref: 30928
- gram stain: negative
- cell length: 2.9 µm
- cell width: 0.85 µm
- cell shape: rod-shaped
- motility: no
pigmentation
- @ref: 30928
- production: yes
Culture and growth conditions
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 30928 | positive | growth | 10-28 | |
| 30928 | positive | optimum | 20 | psychrophilic |
culture pH
| @ref | ability | type | pH | PH range |
|---|---|---|---|---|
| 30928 | positive | growth | 4.0-8.0 | acidophile |
| 30928 | positive | optimum | 6.1 |
Physiology and metabolism
oxygen tolerance
- @ref: 30928
- oxygen tolerance: aerobe
observation
- @ref: 30928
- observation: aggregates in clumps
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 30928 | 16947 | citrate | + | carbon source |
| 30928 | 29987 | glutamate | + | carbon source |
| 30928 | 24996 | lactate | + | carbon source |
| 30928 | 25115 | malate | + | carbon source |
| 30928 | 15361 | pyruvate | + | carbon source |
| 30928 | 33942 | ribose | + | carbon source |
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 30928 | catalase | + | 1.11.1.6 |
| 30928 | cytochrome oxidase | + | 1.9.3.1 |
| 30928 | urease | + | 3.5.1.5 |
Isolation, sampling and environmental information
isolation
- @ref: 30928
- sample type: plant associated
isolation source categories
- Cat1: #Host
- Cat2: #Plants
External links
@ref: 30928
culture collection no.: LMG 25778, CCM 7786
straininfo link
- @ref: 91641
- straininfo: 371133
literature
- topic: Phylogeny
- Pubmed-ID: 23291886
- title: Methylobacterium trifolii sp. nov. and Methylobacterium thuringiense sp. nov., methanol-utilizing, pink-pigmented bacteria isolated from leaf surfaces.
- authors: Wellner S, Lodders N, Glaeser SP, Kampfer P
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.047787-0
- year: 2013
- mesh: Bacterial Typing Techniques, Caryophyllaceae/*microbiology, DNA, Bacterial/genetics, Fatty Acids/analysis, Germany, Methanol/*metabolism, Methylobacterium/*classification/genetics/isolation & purification, Molecular Sequence Data, Nucleic Acid Hybridization, *Phylogeny, *Pigmentation, Plant Leaves/microbiology, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Trifolium/*microbiology
- topic2: Genetics
Reference
| @id | authors | title | doi/url | ID_cross_reference | pubmed |
|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | ||
| 30928 | Barberan A, Caceres Velazquez H, Jones S, Fierer N. | Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information | 10.1128/mSphere.00237-17 | 27258 | 28776041 |
| 91641 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID371133.1 |