Strain identifier
BacDive ID: 13379
Type strain: 
Species: Pseudonocardia sp.
Strain history: <- W.-J. Li, YIM <- Y.-Y. Su
NCBI tax ID(s): 412020 (species)
version 9 (current version)
General
@ref: 12133
BacDive-ID: 13379
DSM-Number: 44974
keywords: 16S sequence, Bacteria
description: Pseudonocardia sp. DSM 44974 is a bacterium that was isolated from forest soil.
NCBI tax id
- NCBI tax id: 412020
- Matching level: species
strain history
- @ref: 12133
- history: <- W.-J. Li, YIM <- Y.-Y. Su
doi: 10.13145/bacdive13379.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Pseudonocardiales
- family: Pseudonocardiaceae
- genus: Pseudonocardia
- species: Pseudonocardia sp.
- full scientific name: Pseudonocardia Henssen 1957 (Approved Lists 1980)
synonyms
@ref synonym 20215 Actinobispora 20215 Amycolata 20215 Pseudoamycolata
@ref: 12133
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Pseudonocardiaceae
genus: Pseudonocardia
species: Pseudonocardia sp.
full scientific name: Pseudonocardia sp.
type strain: no
Culture and growth conditions
culture medium
- @ref: 12133
- name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
- growth: yes
- link: https://mediadive.dsmz.de/medium/65
- composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
culture temp
- @ref: 12133
- growth: positive
- type: growth
- temperature: 28
Isolation, sampling and environmental information
isolation
- @ref: 12133
- sample type: forest soil
- geographic location: Yunnan Province
- country: China
- origin.country: CHN
- continent: Asia
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Terrestrial | #Forest |
| #Environmental | #Terrestrial | #Soil |
taxonmaps
- @ref: 69479
- File name: preview.99_99558.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_10;96_2672;97_3280;98_12070;99_99558&stattab=map
- Last taxonomy: Pseudonocardia xishanensis
- 16S sequence: EF053038
- Sequence Identity:
- Total samples: 75
- soil counts: 42
- aquatic counts: 13
- animal counts: 12
- plant counts: 8
Sequence information
16S sequences
- @ref: 20218
- description: Pseudonocardia sp. YIM 45517 16S ribosomal RNA gene, partial sequence
- accession: EF053038
- length: 1471
- database: nuccore
- NCBI tax ID: 412020
External links
@ref: 12133
culture collection no.: DSM 44974, YIM 45517
straininfo link
- @ref: 82576
- straininfo: 294139
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 12133 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44974) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-44974 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 82576 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID294139.1 | StrainInfo: A central database for resolving microbial strain identifiers |