Strain identifier
BacDive ID: 133712
Type strain: 
Species: Mariniflexile aquimaris
Strain Designation: HWR-17, HDW-17
Strain history: <- JH Yoon, KRIBB
NCBI tax ID(s): 881009 (species)
version 8.1 (current version)
General
@ref: 30240
BacDive-ID: 133712
keywords: 16S sequence, Bacteria, aerobe, Gram-negative, rod-shaped
description: Mariniflexile aquimaris HWR-17 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from seawater.
NCBI tax id
- NCBI tax id: 881009
- Matching level: species
strain history
- @ref: 67771
- history: <- JH Yoon, KRIBB
doi: 10.13145/bacdive133712.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Flavobacteriia
- order: Flavobacteriales
- family: Flavobacteriaceae
- genus: Mariniflexile
- species: Mariniflexile aquimaris
- full scientific name: Mariniflexile aquimaris Jung et al. 2012
@ref: 30240
domain: Bacteria
phylum: Bacteroidetes
class: Flavobacteriia
order: Flavobacteriales
family: Flavobacteriaceae
genus: Mariniflexile
species: Mariniflexile aquimaris
strain designation: HWR-17, HDW-17
type strain: yes
Morphology
cell morphology
| @ref | gram stain | cell length | cell width | cell shape | motility |
|---|---|---|---|---|---|
| 30240 | negative | 2.0-8.0 µm | 0.2-0.5 µm | rod-shaped | no |
| 67771 | negative |
colony morphology
- @ref: 62345
- incubation period: 2 days
pigmentation
- @ref: 30240
- production: yes
Culture and growth conditions
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 30240 | positive | growth | 10-34 | |
| 30240 | positive | optimum | 30 | mesophilic |
| 62345 | positive | growth | 30 | mesophilic |
| 67771 | positive | growth | 30 | mesophilic |
culture pH
- @ref: 30240
- ability: positive
- type: optimum
- pH: 07-08
Physiology and metabolism
oxygen tolerance
| @ref | oxygen tolerance |
|---|---|
| 30240 | aerobe |
| 62345 | aerobe |
| 67771 | aerobe |
halophily
| @ref | salt | growth | tested relation | concentration |
|---|---|---|---|---|
| 30240 | NaCl | positive | growth | 0-5 % |
| 30240 | NaCl | positive | optimum | 2 % |
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 30240 | 22599 | arabinose | + | carbon source |
| 30240 | 17057 | cellobiose | + | carbon source |
| 30240 | 17306 | maltose | + | carbon source |
| 30240 | 17992 | sucrose | + | carbon source |
| 30240 | 53426 | tween 80 | + | carbon source |
Isolation, sampling and environmental information
isolation
| @ref | sample type | sampling date | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|---|
| 30240 | seawater | |||||
| 62345 | Sea water | 2007 | Yellow Sea,Hwang-do | Republic of Korea | KOR | Asia |
| 67771 | From tidal flat | Yellow sea | Republic of Korea | KOR | Asia |
isolation source categories
- Cat1: #Environmental
- Cat2: #Aquatic
- Cat3: #Marine
taxonmaps
- @ref: 69479
- File name: preview.99_123924.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_107;96_28581;97_36027;98_83348;99_123924&stattab=map
- Last taxonomy: Mariniflexile aquimaris
- 16S sequence: HQ144198
- Sequence Identity:
- Total samples: 128
- soil counts: 8
- aquatic counts: 117
- animal counts: 2
- plant counts: 1
Sequence information
16S sequences
- @ref: 30240
- description: Mariniflexile aquimaris strain HWR-17 16S ribosomal RNA gene, partial sequence
- accession: HQ144198
- length: 1471
- database: nuccore
- NCBI tax ID: 881009
GC content
| @ref | GC-content |
|---|---|
| 30240 | 35.7 |
| 67771 | 32.4 |
External links
@ref: 30240
culture collection no.: KCTC 23346, CCUG 60529
straininfo link
- @ref: 91568
- straininfo: 411766
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 21498661 | Mariniflexile aquimaris sp. nov., isolated from seawater, and emended description of the genus Mariniflexile Nedashkovskaya et al. 2006. | Jung YT, Kim JH, Oh TK, Yoon JH | Int J Syst Evol Microbiol | 10.1099/ijs.0.031492-0 | 2011 | Bacterial Typing Techniques, Base Composition, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Flavobacteriaceae/*classification/genetics/*isolation & purification/physiology, Glucosidases/analysis, Hydrogen-Ion Concentration, Korea, Microbial Sensitivity Tests, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/analysis, Phylogeny, RNA, Ribosomal, 16S/genetics, Seawater/*microbiology, Sequence Analysis, DNA, Sodium Chloride/metabolism, Temperature, Vitamin K 2/analysis | Genetics |
| Phylogeny | 22798650 | Mariniflexile jejuense sp. nov., isolated from the junction between seawater and a freshwater spring, and emended description of the genus Mariniflexile. | Jung YT, Yoon JH | Int J Syst Evol Microbiol | 10.1099/ijs.0.042796-0 | 2012 | Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/analysis, Flavobacteriaceae/*classification/genetics/isolation & purification, Fresh Water/*microbiology, Molecular Sequence Data, Nucleic Acid Hybridization, Phosphatidylethanolamines/analysis, *Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, Seawater/*microbiology, Sequence Analysis, DNA, Vitamin K 2/analogs & derivatives/analysis, Water Microbiology | Genetics |
Reference
| @id | authors | title | doi/url | ID_cross_reference | pubmed | catalogue |
|---|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
| 30240 | Barberan A, Caceres Velazquez H, Jones S, Fierer N. | Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information | 10.1128/mSphere.00237-17 | 26582 | 28776041 | |
| 62345 | Curators of the CCUG | https://www.ccug.se/strain?id=60529 | Culture Collection University of Gothenburg (CCUG) (CCUG 60529) | |||
| 67771 | Curators of the KCTC | https://kctc.kribb.re.kr/En/Kctc | ||||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |||
| 91568 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID411766.1 |