Strain identifier
BacDive ID: 133619
Type strain: 
Species: Desertibacter roseus
Strain Designation: 2622
NCBI tax ID(s): 547014 (species)
version 8.1 (current version)
General
@ref: 29796
BacDive-ID: 133619
keywords: 16S sequence, Bacteria, aerobe, Gram-negative, motile, rod-shaped
description: Desertibacter roseus 2622 is an aerobe, Gram-negative, motile bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 547014
- Matching level: species
doi: 10.13145/bacdive133619.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Rhodospirillales
- family: Azospirillaceae
- genus: Desertibacter
- species: Desertibacter roseus
- full scientific name: Desertibacter roseus Liu et al. 2011
@ref: 29796
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhodospirillales
family: Rhodospirillaceae
genus: Desertibacter
species: Desertibacter roseus
strain designation: 2622
type strain: yes
Morphology
cell morphology
- @ref: 29796
- gram stain: negative
- cell shape: rod-shaped
- motility: yes
pigmentation
- @ref: 29796
- production: yes
Culture and growth conditions
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 29796 | positive | growth | 12-42 | |
| 29796 | positive | optimum | 38.5 | mesophilic |
culture pH
| @ref | ability | type | pH | PH range |
|---|---|---|---|---|
| 29796 | positive | growth | 07-10 | alkaliphile |
| 29796 | positive | optimum | 8 |
Physiology and metabolism
oxygen tolerance
- @ref: 29796
- oxygen tolerance: aerobe
halophily
| @ref | salt | growth | tested relation | concentration |
|---|---|---|---|---|
| 29796 | NaCl | positive | growth | 0-1.5 % |
| 29796 | NaCl | positive | optimum | 0.5 % |
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 29796 | 5291 | gelatin | + | carbon source |
| 29796 | 4853 | esculin | + | hydrolysis |
| 29796 | 17632 | nitrate | + | reduction |
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 29796 | alkaline phosphatase | + | 3.1.3.1 |
| 29796 | catalase | + | 1.11.1.6 |
| 29796 | gelatinase | + | |
| 29796 | cytochrome oxidase | + | 1.9.3.1 |
| 29796 | urease | + | 3.5.1.5 |
Isolation, sampling and environmental information
isolation
- @ref: 29796
- sample type: soil
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Sequence information
16S sequences
- @ref: 29796
- description: Desertibacter roseus strain 2622 16S ribosomal RNA gene, partial sequence
- accession: EU833987
- length: 1389
- database: nuccore
- NCBI tax ID: 547014
GC content
- @ref: 29796
- GC-content: 71.4
External links
@ref: 29796
culture collection no.: CCTCC AB 208152, KCTC 22436
literature
- topic: Phylogeny
- Pubmed-ID: 20543156
- title: Desertibacter roseus gen. nov., sp. nov., a gamma radiation-resistant bacterium in the family Rhodospirillaceae, isolated from desert sand.
- authors: Liu M, Dai J, Liu Y, Cai F, Wang Y, Rahman E, Fang C
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.021246-0
- year: 2010
- mesh: Base Composition, DNA, Bacterial/genetics, Desert Climate, Gamma Rays, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Rhodospirillaceae/*classification/genetics/*isolation & purification/radiation effects, *Soil Microbiology
- topic2: Genetics
Reference
| @id | authors | title | doi/url | ID_cross_reference | pubmed |
|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | ||
| 29796 | Barberan A, Caceres Velazquez H, Jones S, Fierer N. | Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information | 10.1128/mSphere.00237-17 | 26174 | 28776041 |