Strain identifier

BacDive ID: 133295

Type strain: Yes

Species: Acinetobacter celticus

Strain history: CIP <- 2018, A. Nemec, NIPH, Prague, Czech Republic: strain ANC 4603

NCBI tax ID(s): 1891224 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 8.1 (current version)

General

@ref: 25072

BacDive-ID: 133295

keywords: 16S sequence, Bacteria, obligate aerobe, Gram-negative, coccus-shaped, colony-forming

description: Acinetobacter celticus ANC 4603 is an obligate aerobe, Gram-negative, coccus-shaped bacterium that forms circular colonies and was isolated from water sample collected at a forest spring.

NCBI tax id

  • NCBI tax id: 1891224
  • Matching level: species

strain history

  • @ref: 117243
  • history: CIP <- 2018, A. Nemec, NIPH, Prague, Czech Republic: strain ANC 4603

doi: 10.13145/bacdive133295.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Moraxellaceae
  • genus: Acinetobacter
  • species: Acinetobacter celticus
  • full scientific name: Acinetobacter celticus Radolfova-Krizova et al. 2016

@ref: 25072

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Moraxellaceae

genus: Acinetobacter

species: Acinetobacter celticus

type strain: yes

Morphology

cell morphology

@refgram staincell shapemotility
25072negativecoccus-shaped
117243negativerod-shapedno

colony morphology

@reftype of hemolysiscolony sizecolony colorcolony shapeincubation periodmedium used
25072gamma1.5 mmgrey-whitecircular1 dayTSA (Trypticase soy agar ,Oxoid]
635571 day

Culture and growth conditions

culture medium

@refnamegrowthlink
25072TSA (Trypticase soy agar ,Oxoid]yes
25072brain-heart infusion medium (Oxoid)yes
117243CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
25072positivegrowth1.0-28.0
25072nogrowth32mesophilic
25072nogrowth35mesophilic
25072nogrowth37mesophilic
25072nogrowth41thermophilic
63557positivegrowth30mesophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
25072obligate aerobe
63557aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
25072620642,3-butanediol-assimilation
25072620642,3-butanediol-carbon source
2507216865gamma-aminobutyric acid-carbon source
25072178794-hydroxybenzoate-carbon source
2507217128adipate-carbon source
2507278208azelaate-carbon source
2507216958beta-alanine-carbon source
2507230719citraconate-carbon source
2507216947citrate-assimilation
2507216947citrate-carbon source
2507218391D-gluconate-carbon source
2507217634D-glucose-builds acid from
2507217634D-glucose-carbon source
2507215588D-malate-carbon source
2507216988D-ribose-carbon source
250725291gelatin-hydrolysis
2507258044gentisate-carbon source
2507217859glutaric acid-carbon source
2507218295histamine-carbon source
2507230849L-arabinose-carbon source
2507216467L-arginine-carbon source
2507215971L-histidine-carbon source
2507215603L-leucine-carbon source
2507215729L-ornithine-carbon source
2507217295L-phenylalanine-carbon source
2507230924L-tartrate-carbon source
25072391504-oxopentanoate-carbon source
2507217148putrescine-carbon source
2507215708trans-aconitate-carbon source
2507262517tricarballylate-carbon source
2507218123trigonelline-carbon source
2507216765tryptamine-carbon source
2507229991L-aspartate+assimilation
2507229991L-aspartate+carbon source
2507230089acetate+carbon source
2507228938ammonium+nitrogen source
2507216236ethanol+carbon source
2507229985L-glutamate+carbon source
2507224996lactate+carbon source
2507215792malonate+assimilation
2507215792malonate+carbon source
2507218401phenylacetate+carbon source
25072trimethoxybenzoate+carbon source

enzymes

@refvalueactivityec
25072catalase+1.11.1.6
25072cytochrome oxidase-1.9.3.1

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentlatitudelongitudeenrichment cultureenrichment culture compositionsampling dateisolation date
25072water sample collected at a forest springnear the village of Rampuše in the Orlick e (Eagle) Mountains (north-eastern Bohemia)Czech RepublicCZEEurope5016minimal mineral mediumcontaining 0.1 % (w/v) sodium acetate as the only source of carbon and energy
63557Water with mudRampuseCzech RepublicCZEEurope2013-09-15
117243Environment, Water sampleForest spring near the village of Rampuse in the Orlicke (Eagle) Mountains, north-eastern BohemiaCzech RepublicCZEEurope2013-09-02

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Spring
#Environmental#Terrestrial#Forest

taxonmaps

  • @ref: 69479
  • File name: preview.99_1050.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_8;96_603;97_706;98_824;99_1050&stattab=map
  • Last taxonomy: Acinetobacter celticus subclade
  • 16S sequence: KX548342
  • Sequence Identity:
  • Total samples: 6912
  • soil counts: 498
  • aquatic counts: 3828
  • animal counts: 2425
  • plant counts: 161

Safety information

risk assessment

  • @ref: 117243
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
25072Acinetobacter genomosp. 33 strain ANC 3831 16S ribosomal RNA gene, partial sequenceKX5483371434nuccore1891224
25072Acinetobacter genomosp. 33 strain ANC 4603 16S ribosomal RNA gene, partial sequenceKX5483381434nuccore1891224
25072Acinetobacter genomosp. 33 strain ANC 4872 16S ribosomal RNA gene, partial sequenceKX5483391434nuccore1891224
25072Acinetobacter genomosp. 33 strain ANC 5499 16S ribosomal RNA gene, partial sequenceKX5483401434nuccore1891224
25072Acinetobacter genomosp. 33 strain ANC 5500 16S ribosomal RNA gene, partial sequenceKX5483411434nuccore1891224
25072Acinetobacter genomosp. 33 strain ANC 5505 16S ribosomal RNA gene, partial sequenceKX5483421434nuccore1891224

GC content

  • @ref: 25072
  • GC-content: 39.4

External links

@ref: 25072

culture collection no.: ANC 4603, CCM 8700, CCUG 69239, CNCTC 7549, CIP 111639

straininfo link

  • @ref: 91405
  • straininfo: 411874

literature

  • topic: Phylogeny
  • Pubmed-ID: 27692035
  • title: Acinetobactercelticus sp. nov., a psychrotolerant species widespread in natural soil and water ecosystems.
  • authors: Radolfova-Krizova L, Maixnerova M, Nemec A
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijsem.0.001526
  • year: 2016
  • mesh: Acinetobacter/*classification/genetics/isolation & purification, Bacterial Typing Techniques, Base Composition, Czech Republic, DNA, Bacterial/genetics, Ecosystem, Genes, Bacterial, Nucleic Acid Hybridization, Phenotype, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, *Water Microbiology
  • topic2: Phenotype

Reference

@idauthorstitledoi/urljournalpubmedcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
25072L. M. Radolfova-Krizova, M.,Nemec, A.Acinetobacter celticus sp. nov., a psychrotolerant species widespread in natural soil and water ecosystems10.1099/ijsem.0.001526IJSEM 66: 5392-5398 201627692035
63557Curators of the CCUGhttps://www.ccug.se/strain?id=69239Culture Collection University of Gothenburg (CCUG) (CCUG 69239)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
91405Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID411874.1
117243Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20111639Collection of Institut Pasteur (CIP 111639)