Strain identifier

BacDive ID: 133286

Type strain: Yes

Species: Coetzeea brasiliensis

Strain Designation: Braz8

Strain history: CIP <- 2016, P. Kämpfer, Giessen Univ., Giessen, Germany: strain Braz 8, Thorsellia sp.

NCBI tax ID(s): 1812101 (species)

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General

@ref: 25096

BacDive-ID: 133286

keywords: 16S sequence, Bacteria, facultative anaerobe, mesophilic, Gram-negative, motile, rod-shaped

description: Coetzeea brasiliensis Braz8 is a facultative anaerobe, mesophilic, Gram-negative bacterium that was isolated from larvae of Anopheles darlingi.

NCBI tax id

  • NCBI tax id: 1812101
  • Matching level: species

strain history

@refhistory
421652016, P. Kämpfer, Giessen Univ., Giessen, Germany: strain Braz 8, Thorsellia sp.
116991CIP <- 2016, P. Kämpfer, Giessen Univ., Giessen, Germany: strain Braz 8, Thorsellia sp.

doi: 10.13145/bacdive133286.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Gammaproteobacteria, not assigned to order
  • family: Thorselliaceae
  • genus: Coetzeea
  • species: Coetzeea brasiliensis
  • full scientific name: Coetzeea brasiliensis Kämpfer et al. 2016

@ref: 25096

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Gammaproteobacteria, not assigned to order

family: Thorselliaceae

genus: Coetzeea

species: Coetzeea brasiliensis

strain designation: Braz8

type strain: yes

Morphology

cell morphology

@refgram staincell lengthcell widthcell shapemotility
25096negative2 µm1 µmrod-shapedyes
116991negativerod-shapedyes

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
25096TSA (Trypticase soy agar)yes
25096NA (Nutrient Agar)yes
42165MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
116991CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

  • @ref: 42165
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 25096
  • oxygen tolerance: facultative anaerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
25096309162-oxoglutarate-assimilation
25096161933-hydroxybenzoate-assimilation
25096178794-hydroxybenzoate-assimilation
2509630089acetate-assimilation
2509617128adipate-assimilation
2509618305arbutin-assimilation
2509635391aspartate-assimilation
2509678208azelaate-assimilation
2509616958beta-alanine-assimilation
2509617057cellobiose-assimilation
2509616383cis-aconitate-assimilation
2509615963ribitol-builds acid from
2509615963ribitol-assimilation
2509618333D-arabitol-builds acid from
2509615824D-fructose-assimilation
2509612936D-galactose-assimilation
2509618391D-gluconate-assimilation
2509617634D-glucose-assimilation
2509627947D-histidine-assimilation
2509617306maltose-assimilation
2509616899D-mannitol-assimilation
2509616024D-mannose-assimilation
2509616988D-ribose-assimilation
2509617924D-sorbitol-builds acid from
2509617924D-sorbitol-assimilation
2509665327D-xylose-assimilation
25096370543-hydroxybutyrate-assimilation
2509617113erythritol-builds acid from
2509616813galactitol-builds acid from
2509617859glutaric acid-assimilation
2509617268myo-inositol-builds acid from
2509617268myo-inositol-assimilation
2509630849L-arabinose-assimilation
2509615603L-leucine-assimilation
2509615589L-malate-assimilation
2509615729L-ornithine-assimilation
2509617295L-phenylalanine-assimilation
25096L-proline-4-nitroanilide-assimilation
2509662345L-rhamnose-builds acid from
2509662345L-rhamnose-assimilation
2509617115L-serine-assimilation
2509616828L-tryptophan-assimilation
2509668428maltitol-assimilation
2509628053melibiose-builds acid from
2509628053melibiose-assimilation
2509637657methyl D-glucoside-builds acid from
2509628037N-acetylgalactosamine-assimilation
25096506227N-acetylglucosamine-assimilation
2509618401phenylacetate-assimilation
2509617272propionate-assimilation
2509617148putrescine-assimilation
2509615361pyruvate-assimilation
2509617814salicin-builds acid from
2509617814salicin-assimilation
250969300suberic acid-assimilation
2509617992sucrose-assimilation
2509615708trans-aconitate-assimilation
2509627082trehalose-builds acid from
2509617057cellobiose+builds acid from
2509617634D-glucose+builds acid from
2509617716lactose+builds acid from
2509616899D-mannitol+builds acid from
2509616024D-mannose+builds acid from
2509665327D-xylose+builds acid from
250964853esculin+hydrolysis
2509630849L-arabinose+builds acid from
2509617306maltose+builds acid from
2509616634raffinose+builds acid from
2509617992sucrose+builds acid from

enzymes

@refvalueactivityec
25096catalase-1.11.1.6
25096cytochrome oxidase-1.9.3.1

Isolation, sampling and environmental information

isolation

@refsample typeenrichment cultureenrichment culture durationenrichment culture temperaturecountryorigin.countrycontinentisolation date
25096larvae of Anopheles darlingiLuria Bertani agar plates (LB;Sigma-Aldrich)2 days30
116991Animal, Larvae of Anapheles arabiensisdarlingiGermanyDEUEurope2012

isolation source categories

  • Cat1: #Host
  • Cat2: #Arthropoda
  • Cat3: #Insecta

Safety information

risk assessment

  • @ref: 116991
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

Sequence information

16S sequences

  • @ref: 25096
  • description: Thorsellia sp. Braz8 16S ribosomal RNA gene, partial sequence
  • accession: KU748636
  • length: 1391
  • database: nuccore
  • NCBI tax ID: 1812101

GC content

  • @ref: 25096
  • GC-content: 38.3
  • method: genome sequence analysis

External links

@ref: 25096

culture collection no.: LMG 29552, CIP 111088

straininfo link

  • @ref: 91403
  • straininfo: 412954

literature

  • topic: Phylogeny
  • Pubmed-ID: 27624755
  • title: Coetzeea brasiliensis gen. nov., sp. nov. isolated from larvae of Anopheles darlingi.
  • authors: Kampfer P, Glaeser SP, Marinotti O, Guy L, Hakansson S, Tadei WP, Busse HJ, Terenius O
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijsem.0.001497
  • year: 2016
  • mesh: Animals, Anopheles/*microbiology, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Enterobacteriaceae/*classification/genetics/isolation & purification, Fatty Acids/chemistry, Larva/microbiology, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, Putrescine/chemistry, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Ubiquinone/chemistry
  • topic2: Transcriptome

Reference

@idauthorstitledoi/urljournalpubmedcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
25096P. G. Kämpfer, S. P.,Marinotti, O.,Guy, L.,Hakansson, S.,Tadei, W. P.,Busse, H. J.,Terenius, O.Coetzeea brasiliensis gen. nov., sp. nov. isolated from larvae of Anopheles darlingi10.1099/ijsem.0.001497IJSEM 66: 5211-5217 201627624755
42165Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/34913
91403Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID412954.1
116991Curators of the CIPhttps://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20111088Collection of Institut Pasteur (CIP 111088)