Strain identifier
BacDive ID: 133126
Type strain: 
Species: Streptococcus cristatus
NCBI tax ID(s): 1302863 (strain), 45634 (species)
version 9.1 (current version)
General
@ref: 25015
BacDive-ID: 133126
keywords: genome sequence, Bacteria, Gram-positive
description: Streptococcus cristatus AS 1.3089 is a Gram-positive bacterium of the family Streptococcaceae.
NCBI tax id
| NCBI tax id | Matching level |
|---|---|
| 1302863 | strain |
| 45634 | species |
doi: 10.13145/bacdive133126.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Streptococcaceae
- genus: Streptococcus
- species: Streptococcus cristatus
- full scientific name: Streptococcus cristatus corrig. Handley et al. 1991
synonyms
@ref synonym 20215 Streptococcus crista 20215 Streptococcus oligofermentans
@ref: 25015
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Streptococcaceae
genus: Streptococcus
species: Streptococcus cristatus
type strain: no
Morphology
cell morphology
- @ref: 69480
- motility: no
- confidence: 91
Culture and growth conditions
culture medium
| @ref | name | growth | composition |
|---|---|---|---|
| 33915 | MEDIUM 6 - Columbia agar with 10 % horse blood | yes | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml) |
| 41045 | MEDIUM 6 - Columbia agar with 10 % horse blood | yes | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml) |
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 33915 | positive | growth | 37 |
| 41045 | positive | growth | 37 |
Physiology and metabolism
spore formation
- @ref: 69481
- spore formation: no
- confidence: 100
Isolation, sampling and environmental information
isolation
- @ref: 41045
- geographic location: Beijing
- country: China
- origin.country: CHN
- continent: Asia
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Streptococcus cristatus AS 1.3089 | GCA_000385925 | complete | ncbi | 1302863 |
| 66792 | Streptococcus oligofermentans AS 1.3089 | 1302863.3 | complete | patric | 1302863 |
| 66792 | Streptococcus oligofermentans AS 1.3089 | 2541047083 | complete | img | 1302863 |
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69481 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 100 | no |
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 86.505 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 93.073 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 96.146 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 82.603 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 95.653 | yes |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 91 | no |
External links
@ref: 25015
culture collection no.: AS 1.3089, LMG 21535
straininfo link
- @ref: 91373
- straininfo: 93897
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 12892133 | Streptococcus oligofermentans sp. nov., a novel oral isolate from caries-free humans. | Tong H, Gao X, Dong X | Int J Syst Evol Microbiol | 10.1099/ijs.0.02493-0 | 2003 | Base Composition, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/genetics, Humans, Molecular Sequence Data, Mouth/*microbiology, Phenotype, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Streptococcus/*classification/genetics/*isolation & purification/metabolism | Pathogenicity |
| Genetics | 23788543 | Complete Genome Sequence of an Oral Commensal, Streptococcus oligofermentans Strain AS 1.3089. | Tong H, Shang N, Liu L, Wang X, Cai J, Dong X | Genome Announc | 10.1128/genomeA.00353-13 | 2013 |
Reference
| @id | authors | title | doi/url | journal | pubmed |
|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | ||
| 25015 | A. S. Jensen, C. F.,Kilian, M. | Re-evaluation of the taxonomy of the Mitis group of the genus Streptococcus based on whole genome phylogenetic analyses, and proposed reclassification of Streptococcus dentisani as Streptococcus oralis subsp. dentisani comb. nov., Streptococcus tigurinus as Streptococcus oralis subsp. tigurinus comb. nov., and Streptococcus oligofermentans as a later synonym of Streptococcus cristatus | 10.1099/ijsem.0.001433 | IJSEM 66: 4803-4820 2016 | 27534397 |
| 33915 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/5828 | |||
| 41045 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/8149 | |||
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | ||
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | ||
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | ||
| 91373 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID93897.1 |