Strain identifier
BacDive ID: 133052
Type strain: 
Species: Streptomyces zhihengii
Strain history: <- W.-J. Li, Yunnan Univ., Yunnan Inst. Microbiol. (YIM), Kunming, China; YIM T102 <- J.-J. Fei and M.-J. Huang
NCBI tax ID(s): 1818004 (species)
version 9 (current version)
General
@ref: 24840
BacDive-ID: 133052
DSM-Number: 42176
keywords: 16S sequence, Bacteria
description: Streptomyces zhihengii DSM 42176 is a bacterium that was isolated from rhizospheric soil of Psammosilene tunicoides.
NCBI tax id
- NCBI tax id: 1818004
- Matching level: species
strain history
- @ref: 24840
- history: <- W.-J. Li, Yunnan Univ., Yunnan Inst. Microbiol. (YIM), Kunming, China; YIM T102 <- J.-J. Fei and M.-J. Huang
doi: 10.13145/bacdive133052.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces zhihengii
- full scientific name: Streptomyces zhihengii Huang et al. 2017
@ref: 24840
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces zhihengii
full scientific name: Streptomyces zhihengii Huang et al. 2017
type strain: yes
Morphology
multimedia
- @ref: 24840
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_42176.jpg
- caption: Medium 987 28°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 24840 | STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium252.pdf | |
| 24840 | ISP2 MEDIUM (DSMZ Medium 987) | yes | https://mediadive.dsmz.de/medium/987 | Name: ISP 2 MEDIUM (DSMZ Medium 987) Composition: Agar 20.0 g/l Malt extract 10.0 g/l Dextrose 4.0 g/l Yeast extract 4.0 g/l Distilled water |
| 24840 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://mediadive.dsmz.de/medium/84 | Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water |
culture temp
- @ref: 24840
- growth: positive
- type: growth
- temperature: 28
Isolation, sampling and environmental information
isolation
- @ref: 24840
- sample type: rhizospheric soil of Psammosilene tunicoides
- host species: Psammosilene tunicoides
- geographic location: Yunnan Province, Lijiang
- country: China
- origin.country: CHN
- continent: Asia
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Terrestrial | #Soil |
| #Host | #Plants | |
| #Host Body-Site | #Plant | #Rhizosphere |
Safety information
risk assessment
- @ref: 24840
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 24840
- description: Streptomyces zhihengii strain YIM T102 16S ribosomal RNA gene, partial sequence
- accession: KU936048
- length: 1518
- database: nuccore
- NCBI tax ID: 1818004
GC content
- @ref: 24840
- GC-content: 70.7
- method: high performance liquid chromatography (HPLC)
External links
@ref: 24840
culture collection no.: DSM 42176, CGMCC 4.7248, KCTC 39115, YIM T102
straininfo link
- @ref: 91319
- straininfo: 407671
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 27169711 | Streptomyces zhihengii sp. nov., isolated from rhizospheric soil of Psammosilene tunicoides. | Huang MJ, Fei JJ, Salam N, Kim CJ, Hozzein WN, Xiao M, Huang HQ, Li WJ | Arch Microbiol | 10.1007/s00203-016-1233-5 | 2016 | Bacterial Typing Techniques, Base Composition/genetics, Caryophyllaceae/*microbiology, China, DNA, Bacterial/genetics, Diaminopimelic Acid/analysis, Fatty Acids/analysis, Nucleic Acid Hybridization, Peptidoglycan/chemistry, Phylogeny, RNA, Ribosomal, 16S/genetics, *Rhizosphere, Sequence Analysis, DNA, Soil Microbiology, Streptomyces/*classification/genetics/*isolation & purification | Transcriptome |
| Phylogeny | 34382928 | Streptomyces genisteinicus sp. nov., a novel genistein-producing actinomycete isolated from a Chinese medicinal plant and proposal of Streptomyces michiganensis Corbaz et al. 1957 as a later heterotypic synonym of Streptomyces xanthochromogenes Arishima et al. 1956. | Hu S, Li K, Wang Y, Guo Y, Zhou M, Tang X, Gao J | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004954 | 2021 | Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Genistein/*metabolism, Nucleic Acid Hybridization, *Phylogeny, Plant Leaves/microbiology, Plants, Medicinal/microbiology, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Streptomyces/classification/isolation & purification, Xanthium/*microbiology | Transcriptome |
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 24840 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-42176 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 42176) | |
| 91319 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID407671.1 |