Strain identifier
BacDive ID: 133035
Type strain: 
Species: Marispirochaeta associata
Strain Designation: JC231
Strain history: <- Ch Sasikala, JNT Univ, India
NCBI tax ID(s): 1560235 (species)
General
@ref: 24823
BacDive-ID: 133035
DSM-Number: 29857
keywords: 16S sequence, Bacteria, anaerobe, motile
description: Marispirochaeta associata JC231 is an anaerobe, motile bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 1560235
- Matching level: species
strain history
| @ref | history |
|---|---|
| 24823 | <- C. Sasikala, Jawaharlal Nehru Technological Univ., Hyderabad, India; JC231 <- Y. Shivani {2013} |
| 67771 | <- Ch Sasikala, JNT Univ, India |
doi: 10.13145/bacdive133035.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/spirochaetota
- domain: Bacteria
- phylum: Spirochaetota
- class: Spirochaetia
- order: Spirochaetales
- family: Spirochaetaceae
- genus: Marispirochaeta
- species: Marispirochaeta associata
- full scientific name: Candidatus Marispirochaeta associata Shivani et al. 2016
@ref: 24823
domain: Bacteria
phylum: Spirochaetes
class: Spirochaetes
order: Spirochaetales
family: Spirochaetaceae
genus: Candidatus Marispirochaeta
species: Candidatus Marispirochaeta associata
full scientific name: Candidatus Marispirochaeta associata Shivani et al. 2016
strain designation: JC231
type strain: no
Morphology
cell morphology
| @ref | motility | gram stain |
|---|---|---|
| 67771 | yes | |
| 67771 | negative |
Culture and growth conditions
culture temp
- @ref: 67771
- growth: positive
- type: growth
- temperature: 35
Physiology and metabolism
oxygen tolerance
- @ref: 67771
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent | latitude | longitude |
|---|---|---|---|---|---|---|---|
| 24823 | soil | Gujarat; Runn of Kutch | India | IND | Asia | 23.1561 | 70.2333 |
| 67771 | From soil | Gujarat, Runn of Kutch | India | IND | Asia |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
taxonmaps
- @ref: 69479
- File name: preview.99_3942.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_434;96_2006;97_2415;98_2988;99_3942&stattab=map
- Last taxonomy: Candidatus Marispirochaeta associata subclade
- 16S sequence: LN614382
- Sequence Identity:
- Total samples: 411
- soil counts: 17
- aquatic counts: 386
- animal counts: 4
- plant counts: 4
Sequence information
16S sequences
- @ref: 24823
- description: Spirochaeta sp. JC231 partial 16S rRNA gene, strain JC231
- accession: LN614382
- length: 1388
- database: nuccore
- NCBI tax ID: 1560235
GC content
| @ref | GC-content | method |
|---|---|---|
| 24823 | 55.7 | sequence analysis |
| 24823 | 54.9 | high performance liquid chromatography (HPLC) |
| 67771 | 55.7 |
External links
@ref: 24823
culture collection no.: DSM 29857, KCTC 15472
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 24823 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-29857 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 29857) | |
| 67771 | Curators of the KCTC | https://kctc.kribb.re.kr/En/Kctc | ||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |