Strain identifier
BacDive ID: 133019
Type strain: 
Species: Brevibacterium sediminis
Strain Designation: FXJ8.309
Strain history: <- Y. Huang, Chinese Acad. Sci. (CAS), Beijing; strain FXJ8.309
NCBI tax ID(s): 1857024 (species)
General
@ref: 24807
BacDive-ID: 133019
DSM-Number: 102230
keywords: 16S sequence, Bacteria, mesophilic
description: Brevibacterium sediminis FXJ8.309 is a mesophilic bacterium that was isolated from deep-sea sediment.
NCBI tax id
- NCBI tax id: 1857024
- Matching level: species
strain history
- @ref: 24807
- history: <- Y. Huang, Chinese Acad. Sci. (CAS), Beijing; strain FXJ8.309
doi: 10.13145/bacdive133019.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micrococcales
- family: Brevibacteriaceae
- genus: Brevibacterium
- species: Brevibacterium sediminis
- full scientific name: Brevibacterium sediminis Chen et al. 2016
@ref: 24807
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Brevibacteriaceae
genus: Brevibacterium
species: Brevibacterium sediminis
full scientific name: Brevibacterium sediminis Chen et al. 2016
strain designation: FXJ8.309
type strain: no
Culture and growth conditions
culture medium
- @ref: 24807
- name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
- growth: yes
- link: https://mediadive.dsmz.de/medium/92
- composition: Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
culture temp
- @ref: 24807
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 24807
- sample type: deep-sea sediment
- geographic location: Southwest Indian Ridge (63.90452° E 27.90953° S, depth of 2461 m)
- country: Indian Ocean
- continent: Asia
- latitude: -27.9095
- longitude: 63.9045
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Marine |
| #Environmental | #Aquatic | #Sediment |
taxonmaps
- @ref: 69479
- File name: preview.99_4584.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15817;96_81;97_619;98_713;99_4584&stattab=map
- Last taxonomy: Brevibacterium
- 16S sequence: KX356314
- Sequence Identity:
- Total samples: 2870
- soil counts: 309
- aquatic counts: 309
- animal counts: 2183
- plant counts: 69
Safety information
risk assessment
- @ref: 24807
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 24807
- description: Brevibacterium sediminis strain CGMCC 1.15473 16S ribosomal RNA gene, partial sequence
- accession: KX356314
- length: 1491
- database: ena
- NCBI tax ID: 1857024
External links
@ref: 24807
culture collection no.: DSM 102230, CGMCC 1.15473
straininfo link
- @ref: 91293
- straininfo: 399198
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 24807 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-102230 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 102230) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 91293 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID399198.1 |