Strain identifier
BacDive ID: 133001
Type strain: 
Species: Pseudoalteromonas gelatinilytica
Strain Designation: F-2-11
Strain history: <- Y.-H. Wu, Second Inst. Oceanography, State Oceanic Admin., Hangzhou, China; F-2-11 <- FangHan
NCBI tax ID(s): 1703256 (species)
General
@ref: 24789
BacDive-ID: 133001
DSM-Number: 100953
keywords: 16S sequence, Bacteria
description: Pseudoalteromonas gelatinilytica F-2-11 is a bacterium that was isolated from surface seawater.
NCBI tax id
- NCBI tax id: 1703256
- Matching level: species
strain history
- @ref: 24789
- history: <- Y.-H. Wu, Second Inst. Oceanography, State Oceanic Admin., Hangzhou, China; F-2-11 <- FangHan
doi: 10.13145/bacdive133001.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Alteromonadales
- family: Pseudoalteromonadaceae
- genus: Pseudoalteromonas
- species: Pseudoalteromonas gelatinilytica
- full scientific name: Pseudoalteromonas gelatinilytica Yan et al. 2016
@ref: 24789
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Alteromonadales
family: Pseudoalteromonadaceae
genus: Pseudoalteromonas
species: Pseudoalteromonas gelatinilytica
full scientific name: Pseudoalteromonas gelatinilytica Yan et al. 2016
strain designation: F-2-11
type strain: no
Culture and growth conditions
culture medium
- @ref: 24789
- name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514
- composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
culture temp
- @ref: 24789
- growth: positive
- type: growth
- temperature: 28
Isolation, sampling and environmental information
isolation
- @ref: 24789
- sample type: surface seawater
- geographic location: East China Sea (site A, 122° 34.801' E 29° 22.879' N)
- country: China
- origin.country: CHN
- continent: Asia
- latitude: 29.3816
- longitude: 122.58
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Marine |
| #Environmental | #Aquatic | #Surface water |
taxonmaps
- @ref: 69479
- File name: preview.99_1621.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_57;96_122;97_1070;98_1279;99_1621&stattab=map
- Last taxonomy: Pseudoalteromonas
- 16S sequence: KT377062
- Sequence Identity:
- Total samples: 691
- soil counts: 4
- aquatic counts: 660
- animal counts: 23
- plant counts: 4
Safety information
risk assessment
- @ref: 24789
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 24789
- description: Pseudoalteromonas gelatinilytica strain F-2-11 16S ribosomal RNA gene, partial sequence
- accession: KT377062
- length: 1474
- database: nuccore
- NCBI tax ID: 1703256
External links
@ref: 24789
culture collection no.: DSM 100953, CGMCC 1.15364
straininfo link
- @ref: 91277
- straininfo: 400322
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 24789 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-100953 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 100953) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 91277 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID400322.1 |