Strain identifier

BacDive ID: 132829

Type strain: No

Species: Thermus rehai

Strain Designation: RH99-GF7504

Strain history: <- Q. Peng, YIM; RH99-GF7504

NCBI tax ID(s): 153832 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 24617

BacDive-ID: 132829

DSM-Number: 15653

keywords: 16S sequence, Bacteria, thermophilic

description: Thermus rehai RH99-GF7504 is a thermophilic bacterium that was isolated from hot spring.

NCBI tax id

  • NCBI tax id: 153832
  • Matching level: species

strain history

  • @ref: 24617
  • history: <- Q. Peng, YIM; RH99-GF7504

doi: 10.13145/bacdive132829.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/deinococcota
  • domain: Bacteria
  • phylum: Deinococcota
  • class: Deinococci
  • order: Thermales
  • family: Thermaceae
  • genus: Thermus
  • species: Thermus rehai
  • full scientific name: Thermus rehai Lin et al. 2002

@ref: 24617

domain: Bacteria

phylum: Deinococcus-Thermus

class: Deinococci

order: Thermales

family: Thermaceae

genus: Thermus

species: Thermus rehai

full scientific name: Thermus rehai Lin et al. 2002

strain designation: RH99-GF7504

type strain: no

Culture and growth conditions

culture medium

  • @ref: 24617
  • name: THERMUS 162 MEDIUM (DSMZ Medium 878)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/878
  • composition: Name: THERMUS 162 MEDIUM (DSMZ Medium 878) Composition: Agar 28.0 g/l Na2HPO4 x 12 H2O 4.3 g/l Yeast extract 1.0 g/l Tryptone 1.0 g/l KH2PO4 0.544 g/l MgCl2 x 6 H2O 0.2 g/l Nitrilotriacetic acid 0.1 g/l CaSO4 x 2 H2O 0.04 g/l Fe(III) citrate 0.00122472 g/l MnSO4 x H2O 0.00114 g/l ZnSO4 x 7 H2O 0.00025 g/l H3BO3 0.00025 g/l CoCl2 x 6 H2O 2.25e-05 g/l CuSO4 x 5 H2O 1.25e-05 g/l Na2MoO4 x 2 H2O 1.25e-05 g/l H2SO4 Distilled water

culture temp

  • @ref: 24617
  • growth: positive
  • type: growth
  • temperature: 70
  • range: thermophilic

Isolation, sampling and environmental information

isolation

  • @ref: 24617
  • sample type: hot spring
  • geographic location: Yunnan Province, Tengchong, Rehai geothermal area
  • country: China
  • origin.country: CHN
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Thermal spring
#Condition#Thermophilic (>45°C)

taxonmaps

  • @ref: 69479
  • File name: preview.99_1459.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_87;96_457;97_524;98_1150;99_1459&stattab=map
  • Last taxonomy: Thermus tengchongensis subclade
  • 16S sequence: AF331969
  • Sequence Identity:
  • Total samples: 1489
  • soil counts: 36
  • aquatic counts: 440
  • animal counts: 982
  • plant counts: 31

Sequence information

16S sequences

  • @ref: 24617
  • description: Thermus rehai 16S ribosomal RNA gene, partial sequence
  • accession: AF331969
  • length: 1481
  • database: ena
  • NCBI tax ID: 153832

GC content

  • @ref: 24617
  • GC-content: 63.1
  • method: fluorimetric

External links

@ref: 24617

culture collection no.: DSM 15653, CCTCC AB 200292

literature

  • topic: Phylogeny
  • Pubmed-ID: 12362405
  • title: Thermus rehai sp. nov., isolated from Rehai of Tengchong, Yunnan Province, China.
  • authors: Lin L, Chen C, Peng Q, Ben K, Zhou Z
  • journal: J Basic Microbiol
  • DOI: 10.1002/1521-4028(200210)42:5<337::AID-JOBM337>3.0.CO;2-B
  • year: 2002
  • mesh: China, Hot Temperature, Hydrogen-Ion Concentration, Molecular Sequence Data, Phylogeny, Pigments, Biological/analysis, RNA, Bacterial/analysis, RNA, Ribosomal, 16S/analysis, Thermus/genetics/*isolation & purification
  • topic2: Stress

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24617Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-15653Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 15653)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/