Strain identifier
BacDive ID: 132821
Type strain: 
Species: Rhodothermus marinus
Strain history: <- J. K. Kristjansson, Prokaria Ltd, Reykjavik, Iceland; PRI 493
NCBI tax ID(s): 29549 (species)
version 9 (current version)
General
@ref: 18911
BacDive-ID: 132821
DSM-Number: 16675
keywords: Bacteria
description: Rhodothermus marinus DSM 16675 is a bacterium that was isolated from submarine hot spring, 2 m depth.
NCBI tax id
- NCBI tax id: 29549
- Matching level: species
strain history
- @ref: 18911
- history: <- J. K. Kristjansson, Prokaria Ltd, Reykjavik, Iceland; PRI 493
doi: 10.13145/bacdive132821.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/rhodothermota
- domain: Bacteria
- phylum: Rhodothermota
- class: Rhodothermia
- order: Rhodothermales
- family: Rhodothermaceae
- genus: Rhodothermus
- species: Rhodothermus marinus
- full scientific name: Rhodothermus marinus Alfredsson et al. 1995
synonyms
- @ref: 20215
- synonym: Rhodothermus obamensis
@ref: 18911
domain: Bacteria
phylum: Rhodothermaeota
class: Rhodothermia
order: Cytophagales
family: Rhodothermaceae
genus: Rhodothermus
species: Rhodothermus marinus
full scientific name: Rhodothermus marinus Alfredsson et al. 1995 emend. Park et al. 2019
type strain: no
Culture and growth conditions
culture medium
- @ref: 18911
- name: MODIFIED THERMUS 162 MEDIUM (DSMZ Medium 630)
- growth: yes
- link: https://mediadive.dsmz.de/medium/630
- composition: Name: MODIFIED THERMUS 162 MEDIUM (DSMZ Medium 630; with strain-specific modifications) Composition: Agar 28.0 g/l NaCl 10.0 g/l Na2HPO4 x 12 H2O 4.3 g/l Yeast extract 2.5 g/l Tryptone 2.5 g/l KH2PO4 0.544 g/l MgCl2 x 6 H2O 0.2 g/l CaSO4 x 2 H2O 0.04 g/l Nitrilotriacetic acid 0.0064 g/l Fe(III) citrate 0.00122472 g/l FeCl2 x 4 H2O 0.0005 g/l MnCl2 x 4 H2O 0.00025 g/l CoCl2 x 4 H2O 0.00015 g/l CuCl2 x 2 H2O 2.5e-05 g/l Na2MoO4 x 2 H2O 2.5e-05 g/l H3BO3 1e-05 g/l NiCl2 x 6 H2O 1e-05 g/l Distilled water
culture temp
- @ref: 18911
- growth: positive
- type: growth
- temperature: 65
Isolation, sampling and environmental information
isolation
- @ref: 18911
- sample type: submarine hot spring, 2 m depth
- geographic location: Reykjanes, Isafjardardjup
- country: Iceland
- origin.country: ISL
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Marine |
| #Environmental | #Aquatic | #Thermal spring |
| #Condition | #Thermophilic (>45°C) |
Safety information
risk assessment
- @ref: 18911
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
External links
@ref: 18911
culture collection no.: DSM 16675, PRI 493
straininfo link
- @ref: 91116
- straininfo: 397744
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Cultivation | 31522265 | Cultivation technology development of Rhodothermus marinus DSM 16675. | Ron EYC, Sardari RRR, Anthony R, van Niel EWJ, Hreggvidsson GO, Nordberg-Karlsson E | Extremophiles | 10.1007/s00792-019-01129-0 | 2019 | *Bioreactors, Carotenoids/metabolism, Culture Media/chemistry, Rhodothermus/*growth & development | Metabolism |
| Metabolism | 36274123 | Medium development and production of carotenoids and exopolysaccharides by the extremophile Rhodothermus marinus DSM16675 in glucose-based defined media. | Mukti IJ, Sardari RRR, Kristjansdottir T, Hreggvidsson GO, Karlsson EN | Microb Cell Fact | 10.1186/s12934-022-01946-7 | 2022 | Carotenoids, Glucose/metabolism, *Extremophiles/metabolism, Culture Media/chemistry, *Trace Elements, Reproducibility of Results, Polysaccharides, Amino Acids, Vitamins, Phosphates | Biotechnology |
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 18911 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 16675) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-16675 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 91116 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID397744.1 | StrainInfo: A central database for resolving microbial strain identifiers |