Strain identifier
BacDive ID: 132820
Type strain:
Species: Rhodomicrobium vannielii
Strain Designation: BF-14
Strain history: <- V. Yurkov, Dept. Microbiol., Univ. Manitoba, Winnipeg, Canada; BF-14 <- S. T. Mullineaux
NCBI tax ID(s): 1069 (species)
General
@ref: 24609
BacDive-ID: 132820
DSM-Number: 23294
keywords: 16S sequence, Bacteria
description: Rhodomicrobium vannielii BF-14 is a bacterium of the family Hyphomicrobiaceae.
NCBI tax id
- NCBI tax id: 1069
- Matching level: species
strain history
- @ref: 24609
- history: <- V. Yurkov, Dept. Microbiol., Univ. Manitoba, Winnipeg, Canada; BF-14 <- S. T. Mullineaux
doi: 10.13145/bacdive132820.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Hyphomicrobiales
- family: Hyphomicrobiaceae
- genus: Rhodomicrobium
- species: Rhodomicrobium vannielii
- full scientific name: Rhodomicrobium vannielii Duchow and Douglas 1949 (Approved Lists 1980)
@ref: 24609
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhizobiales
family: Hyphomicrobiaceae
genus: Rhodomicrobium
species: Rhodomicrobium vannielii
full scientific name: Rhodomicrobium vannielii Duchow and Douglas 1949
strain designation: BF-14
type strain: no
Culture and growth conditions
culture medium
- @ref: 24609
- name: SUCCINATE MINIMAL SALTS MEDIUM (SMS) (DSMZ Medium 1372)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1372
- composition: Name: SUCCINATE MINIMAL SALTS MEDIUM (SMS) (DSMZ Medium 1372) Composition: Sodium succinate 2.2 g/l NH4Cl 1.0 g/l K2HPO4 0.9 g/l KH2PO4 0.6 g/l MgSO4 x 7 H2O 0.2 g/l Yeast extract 0.1 g/l CaCl2 x 6 H2O 0.075 g/l EDTA 0.01 g/l Thiamine-HCl x 2 H2O 0.0008 g/l Nicotinic acid 0.0008 g/l FeSO4 x 6 H2O 0.0006 g/l Biotin 0.00016 g/l Vitamin B12 4e-05 g/l ZnSO4 x 7 H2O 1e-05 g/l CoCl2 x 6 H2O 1e-05 g/l MnCl2 x 4 H2O 6e-06 g/l Na2MoO4 x 2 H2O 6e-06 g/l H3BO3 4e-06 g/l NiCl2 x 6 H2O 4e-06 g/l CuCl2 x 2 H2O 2e-06 g/l Distilled water
culture temp
- @ref: 24609
- growth: positive
- type: growth
- temperature: 28
Isolation, sampling and environmental information
isolation
- @ref: 24609
- geographic location: Alberta, Banff National Park, Sulphur Mountain, Upper Middle Springs
- country: Canada
- origin.country: CAN
- continent: North America
taxonmaps
- @ref: 69479
- File name: preview.99_3623.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_244;96_1880;97_2258;98_2771;99_3623&stattab=map
- Last taxonomy: Rhodomicrobium
- 16S sequence: AM691111
- Sequence Identity:
- Total samples: 4835
- soil counts: 2659
- aquatic counts: 1719
- animal counts: 222
- plant counts: 235
Safety information
risk assessment
- @ref: 24609
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 24609
- description: Rhodomicrobium vannielii partial 16S rRNA gene, strain BF14
- accession: AM691111
- length: 1470
- database: nuccore
- NCBI tax ID: 1069
External links
@ref: 24609
culture collection no.: DSM 23294
straininfo link
- @ref: 91115
- straininfo: 400728
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
24609 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-23294 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 23294) | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
91115 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID400728.1 |