Strain identifier
BacDive ID: 132785
Type strain: 
Species: Psychrobacter glacincola
Strain Designation: BNF20
Strain history: <- C. Muñoz, Universidad de Santiago de Chile, Dep. de Biología; BNF20 <- C. Vasquez
NCBI tax ID(s): 56810 (species)
General
@ref: 24574
BacDive-ID: 132785
DSM-Number: 102806
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Psychrobacter glacincola BNF20 is a mesophilic bacterium that was isolated from Antarctic.
NCBI tax id
- NCBI tax id: 56810
- Matching level: species
strain history
- @ref: 24574
- history: <- C. Muñoz, Universidad de Santiago de Chile, Dep. de Biología; BNF20 <- C. Vasquez
doi: 10.13145/bacdive132785.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Moraxellaceae
- genus: Psychrobacter
- species: Psychrobacter glacincola
- full scientific name: Psychrobacter glacincola Bowman et al. 1997
@ref: 24574
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Moraxellaceae
genus: Psychrobacter
species: Psychrobacter glacincola
full scientific name: Psychrobacter glacincola Bowman et al. 1997
strain designation: BNF20
type strain: no
Culture and growth conditions
culture medium
- @ref: 24574
- name: LB (Luria-Bertani) MEDIUM (DSMZ Medium 381)
- growth: yes
- link: https://mediadive.dsmz.de/medium/381
- composition: Name: LB (Luria-Bertani) MEDIUM (DSMZ Medium 381) Composition: Agar 20.0 g/l NaCl 10.0 g/l Tryptone 10.0 g/l Yeast extract 5.0 g/l Distilled water
culture temp
- @ref: 24574
- growth: positive
- type: growth
- temperature: 25
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 24574
- sample type: Antarctic
- country: Chile
- origin.country: CHL
- continent: Middle and South America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Condition | #Psychrophilic (<10°C) | |
| #Climate | #Cold | #Polar |
Safety information
risk assessment
- @ref: 24574
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 24574
- description: Psychrobacter immobilis strain BNF20 16S ribosomal RNA gene, partial sequence
- accession: KF701041
- length: 918
- database: ena
- NCBI tax ID: 498
Genome sequences
- @ref: 66792
- description: Psychrobacter glacincola BNF20
- accession: 2671181154
- assembly level: draft
- database: img
- NCBI tax ID: 56810
External links
@ref: 24574
culture collection no.: DSM 102806
straininfo link
- @ref: 91080
- straininfo: 400354
literature
- Pubmed-ID: 29479501
- title: Comparative genomic analysis of a new tellurite-resistant Psychrobacter strain isolated from the Antarctic Peninsula.
- authors: Munoz-Villagran CM, Mendez KN, Cornejo F, Figueroa M, Undabarrena A, Morales EH, Arenas-Salinas M, Arenas FA, Castro-Nallar E, Vasquez CC
- journal: PeerJ
- DOI: 10.7717/peerj.4402
- year: 2018
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 24574 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-102806 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 102806) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 91080 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID400354.1 |